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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG17486-RA through 18771 annotations produced 1 hits



(CG17486):

Annotation Number : CG17486
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032997
Gbrowse : chr2R:506536-508340 (+) // 100.0 //
Probeset : 1627665_at
Accessions : protein= NP_001036446;, nucleotide= NM_001042981;
Interpro : 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation
FlyMine data for FBgn0032997.
BioGrid reports that CG17486 interacts with CG5164 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain330 44 of 4 1.00None
Head295 114 of 4 0.90None
Eye396 194 of 4 1.22Up
Thoracicoabdominal ganglion383 114 of 4 1.20Up
Salivary gland802 54 of 4 2.48Up
Crop341 94 of 4 1.10None
Midgut350 234 of 4 1.10None
Tubule535 134 of 4 1.70Up
Hindgut297 124 of 4 0.90None
Heart415 64 of 4 1.28Up
Fat body463 354 of 4 1.43Up
Ovary536 84 of 4 1.70Up
Testis105 54 of 4 0.30Down
Male accessory glands560 134 of 4 1.70Up
Virgin spermatheca488 84 of 4 1.51Up
Mated spermatheca454 84 of 4 1.40Up
Adult carcass379 174 of 4 1.20Up
Larval CNS546 134 of 4 1.69Up
Larval Salivary gland658 304 of 4 2.03Up
Larval midgut310 114 of 4 0.96None
Larval tubule510 204 of 4 1.60Up
Larval hindgut371 104 of 4 1.15Up
Larval fat body512 384 of 4 1.60Up
Larval trachea366 274 of 4 1.13Up
Larval carcass453 234 of 4 1.40Up
S2 cells (growing)427 64 of 4 1.32Up
Whole fly323 84 of 4

Looking for CG17486-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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