FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17498-RA through 18771 annotations produced 1 hits

mad2 (mad2):

Annotation Number : CG17498
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035640
Gbrowse : chr3L:5805231-5806183 (-) // 100.0 //
Probeset : 1640938_at
Accessions : protein= NP_647991;, nucleotide= NM_139734;
Pathway : 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural simi
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0035640.
BDGP gene expression has embryonic in situ data for CG17498: 12 pix of staining in 13 body parts.
BioGrid reports that CG17498 interacts with CG32000 CG7296 CG14534 CG5352 CG11182 CG2063 CG14884 CG3629 CG11546 CG14827 CG11802 CG6233 CG6103 CG14254 CG17746 CG5568 CG6163 CG31811 CG31045 CG31038 CG6488 CG30440 CG17706 CG11120 CG2189 CG13625 CG2711 CG3415 CG1550 CG4264 CG33553 CG2116 CG9108 CG7602 CG11380 CG32169 CG7182 CG15475 CG33484 CG3184 CG33275 CG13834 .
TRiP has 1 RNAi stocks for FBgn0035640 available for purchase.
VDRC has 5 RNAi stocks for FBgn0035640 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	4 of 4	0.00	Down
Head	13 ± 1	3 of 4	0.00	Down
Eye	10 ± 2	3 of 4	0.04	Down
Thoracicoabdominal ganglion	24 ± 3	4 of 4	0.10	Down
Salivary gland	10 ± 2	0 of 4	0.04	Down
Crop	18 ± 2	1 of 4	0.10	Down
Midgut	18 ± 2	0 of 4	0.10	Down
Tubule	13 ± 1	1 of 4	0.00	Down
Hindgut	15 ± 2	1 of 4	0.10	Down
Heart	14 ± 2	2 of 4	0.05	Down
Fat body	11 ± 5	0 of 4	0.04	Down
Ovary	672 ± 10	4 of 4	2.30	Up
Testis	251 ± 3	4 of 4	0.80	Down
Male accessory glands	11 ± 2	0 of 4	0.00	Down
Virgin spermatheca	12 ± 2	1 of 4	0.04	Down
Mated spermatheca	11 ± 1	2 of 4	0.04	Down
Adult carcass	17 ± 2	0 of 4	0.10	Down
Larval CNS	391 ± 9	4 of 4	1.32	Up
Larval Salivary gland	16 ± 0	4 of 4	0.06	Down
Larval midgut	24 ± 3	4 of 4	0.08	Down
Larval tubule	18 ± 1	4 of 4	0.10	Down
Larval hindgut	30 ± 4	4 of 4	0.10	Down
Larval fat body	52 ± 20	4 of 4	0.20	Down
Larval trachea	100 ± 9	4 of 4	0.34	Down
Larval carcass	43 ± 3	4 of 4	0.15	Down
S2 cells (growing)	306 ± 4	4 of 4	1.03	None
Whole fly	297 ± 10	4 of 4

Looking for CG17498-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720