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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG17523-RA through 18771 annotations produced 1 hits



Glutathione S transferase E2 (GstE2):

Annotation Number : CG17523
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063498
Gbrowse : chr2R:14286992-14287884 (+) // 100.0 //
Probeset : 1641429_at
Accessions : protein= NP_611324;, nucleotide= NM_137480;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0063498.
VDRC has 1 RNAi stocks for FBgn0063498 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain583 ± 174 of 426.40Up
Head268 ± 94 of 412.10Up
Eye283 ± 54 of 412.83Up
Thoracicoabdominal ganglion624 ± 214 of 428.30Up
Salivary gland17 ± 22 of 4 0.79None
Crop39 ± 14 of 4 1.80Up
Midgut9 ± 22 of 4 0.40Down
Tubule42 ± 14 of 4 1.90Up
Hindgut28 ± 24 of 4 1.30None
Heart97 ± 64 of 4 4.40Up
Fat body11 ± 44 of 4 0.50Down
Ovary4 ± 11 of 4 0.20Down
Testis19 ± 14 of 4 0.90None
Male accessory glands15 ± 14 of 4 0.70None
Virgin spermatheca16 ± 04 of 4 0.75None
Mated spermatheca17 ± 33 of 4 0.79None
Adult carcass31 ± 24 of 4 1.40Up
Larval CNS158 ± 224 of 4 7.17Up
Larval Salivary gland8 ± 14 of 4 0.38Down
Larval midgut7 ± 10 of 4 0.35Down
Larval tubule6 ± 12 of 4 0.30Down
Larval hindgut8 ± 13 of 4 0.37Down
Larval fat body7 ± 21 of 4 0.40Down
Larval trachea11 ± 33 of 4 0.54Down
Larval carcass12 ± 14 of 4 0.58Down
S2 cells (growing)544 ± 144 of 424.63Up
Whole fly22 ± 24 of 4

Looking for CG17523-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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