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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG17527-RA through 18771 annotations produced 1 hits



Glutathione S transferase E5 (GstE5):

Annotation Number : CG17527
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063495
Gbrowse : chr2R:14292138-14292807 (+) // 100.0 //
Probeset : 1624732_at
Accessions : protein= NP_611327;, nucleotide= NM_137483;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0063495.
VDRC has 1 RNAi stocks for FBgn0063495 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 0.10Down
Head94 104 of 4 2.10Up
Eye68 114 of 4 1.54None
Thoracicoabdominal ganglion5 20 of 4 0.10Down
Salivary gland18 01 of 4 0.40Down
Crop127 144 of 4 2.90Up
Midgut351 94 of 4 7.90Up
Tubule319 184 of 4 7.20Up
Hindgut418 154 of 4 9.40Up
Heart12 34 of 4 0.29Down
Fat body11 122 of 4 0.26Down
Ovary5 11 of 4 0.10Down
Testis18 24 of 4 0.40Down
Male accessory glands15 21 of 4 0.30Down
Virgin spermatheca17 24 of 4 0.39Down
Mated spermatheca25 24 of 4 0.57Down
Adult carcass42 54 of 4 0.90None
Larval CNS3 10 of 4 0.08Down
Larval Salivary gland6 20 of 4 0.14Down
Larval midgut124 234 of 4 2.80Up
Larval tubule140 94 of 4 3.20Up
Larval hindgut121 314 of 4 2.73None
Larval fat body15 23 of 4 0.40Down
Larval trachea32 54 of 4 0.73Down
Larval carcass15 43 of 4 0.34Down
S2 cells (growing)5 00 of 4 0.11Down
Whole fly44 14 of 4

Looking for CG17527-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime