FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1759-RB through 18771 annotations produced 1 hits

caudal (cad):

Annotation Number : CG1759
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000251
Gbrowse : chr2L:20770893-20783132 (+) // 100.0 //
Probeset : 1635796_a_at
Accessions : protein= NP_476954; /// NP_599128;, nucleotide= NM_057606; /// NM_134301;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //
FlyMine data for FBgn0000251.
BDGP gene expression has embryonic in situ data for cad: 84 pix of staining in 16 body parts.
Homophila reports that CG1759 is a close match (6e-12) to human gene HOXD4;HOX4B (NP_055436), a gene associated with {Leukemia, acute lymphoblastic, susceptibility to} (3).
BioGrid reports that CG1759 interacts with CG32647 CG1883 CG2199 CG31140 CG4068 CG4491 Dmel CG34168 CG6533 CG6637 CG6933 CG7765 CG8280 .
VDRC has 3 RNAi stocks for FBgn0000251 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	0.00	Down
Head	3 ± 1	1 of 4	0.00	Down
Eye	3 ± 1	1 of 4	0.01	Down
Thoracicoabdominal ganglion	15 ± 2	4 of 4	0.00	Down
Salivary gland	6 ± 2	0 of 4	0.01	Down
Crop	5 ± 1	0 of 4	0.00	Down
Midgut	380 ± 15	4 of 4	0.70	Down
Tubule	3039 ± 128	4 of 4	6.00	Up
Hindgut	441 ± 19	4 of 4	0.90	Down
Heart	6 ± 2	3 of 4	0.01	Down
Fat body	18 ± 19	3 of 4	0.04	Down
Ovary	1270 ± 14	4 of 4	2.50	Up
Testis	315 ± 13	4 of 4	0.60	Down
Male accessory glands	3 ± 2	1 of 4	0.00	Down
Virgin spermatheca	18 ± 3	4 of 4	0.04	Down
Mated spermatheca	9 ± 4	2 of 4	0.02	Down
Adult carcass	22 ± 6	2 of 4	0.00	Down
Larval CNS	5 ± 2	2 of 4	0.01	Down
Larval Salivary gland	3 ± 1	0 of 4	0.01	Down
Larval midgut	470 ± 12	4 of 4	0.92	None
Larval tubule	2082 ± 18	4 of 4	4.10	Up
Larval hindgut	518 ± 23	4 of 4	1.02	None
Larval fat body	65 ± 30	4 of 4	0.10	Down
Larval trachea	4 ± 5	2 of 4	0.01	Down
Larval carcass	37 ± 2	4 of 4	0.07	Down
S2 cells (growing)	4 ± 1	1 of 4	0.01	Down
Whole fly	509 ± 10	4 of 4

Looking for CG1759-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720