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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1768-RA through 18771 annotations produced 1 hits



chr2L:20758146-20767523 (+) // 100.0 // (diaphanous):

Annotation Number : CG1768
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1625942_s_at
Accessions : protein= , nucleotide= NP_476981; /// NP_724285;
Pathway : "0000910 // cytokinesis // inferred from mutant phenotype /// 0000910 // cytokinesis // non-traceable author statement /
Interpro : actomyosin contractile ring assembly // inferred from mutant phenotype /// 0000915 // cytokinesis
FlyMine data for full length.
Homophila reports that CG1768 is a close match (3e-80) to human gene DIA;DIAPH2;POF2 (NP_009293), a gene associated with Premature ovarian failure, 300511 (3).
BioGrid reports that CG1768 interacts with CG3510 CG3510 CG8114 CG8416 CG8114 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain150 ± 74 of 4 0.90None
Head164 ± 254 of 4 1.00None
Eye39 ± 24 of 4 0.24Down
Thoracicoabdominal ganglion137 ± 154 of 4 0.80None
Salivary gland102 ± 124 of 4 0.62None
Crop531 ± 304 of 4 3.20Up
Midgut431 ± 114 of 4 2.60Up
Tubule640 ± 404 of 4 3.90Up
Hindgut783 ± 364 of 4 4.70Up
Heart43 ± 74 of 4 0.26Down
Fat body38 ± 134 of 4 0.23Down
Ovary263 ± 24 of 4 1.60Up
Testis45 ± 24 of 4 0.30Down
Male accessory glands126 ± 114 of 4 0.80None
Virgin spermatheca75 ± 44 of 4 0.46Down
Mated spermatheca117 ± 94 of 4 0.71None
Adult carcass81 ± 44 of 4 0.50Down
Larval CNS28 ± 34 of 4 0.18Down
Larval Salivary gland140 ± 54 of 4 0.85None
Larval midgut148 ± 194 of 4 0.90None
Larval tubule513 ± 24 of 4 3.10Up
Larval hindgut189 ± 204 of 4 1.15None
Larval fat body68 ± 124 of 4 0.40Down
Larval trachea76 ± 264 of 4 0.46Down
Larval carcass77 ± 84 of 4 0.47Down
S2 cells (growing)207 ± 104 of 4 1.26None
Whole fly165 ± 214 of 4

Looking for CG1768-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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