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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG17785-RA through 18771 annotations produced 1 hits



Golgin84 (Golgin84):

Annotation Number : CG17785
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039188
Gbrowse : chr3R:20181789-20183645 (-) // 100.0 //
Probeset : 1632897_at
Accessions : protein= NP_651250;, nucleotide= NM_142993;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inf
FlyMine data for FBgn0039188.
BDGP gene expression has embryonic in situ data for Golgin84: 8 pix of staining in 1 body parts.
BioGrid reports that CG17785 interacts with CG5026 CG6398 CG8487 Dmel CG17162 .
TRiP has 1 RNAi stocks for FBgn0039188 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039188 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain154 ± 54 of 4 1.00None
Head101 ± 84 of 4 0.70Down
Eye75 ± 14 of 4 0.49Down
Thoracicoabdominal ganglion135 ± 74 of 4 0.90None
Salivary gland235 ± 64 of 4 1.52Up
Crop115 ± 34 of 4 0.70Down
Midgut105 ± 84 of 4 0.70Down
Tubule66 ± 24 of 4 0.40Down
Hindgut111 ± 24 of 4 0.70Down
Heart82 ± 34 of 4 0.53Down
Fat body79 ± 164 of 4 0.51Down
Ovary179 ± 54 of 4 1.20Up
Testis529 ± 144 of 4 3.40Up
Male accessory glands347 ± 74 of 4 2.20Up
Virgin spermatheca99 ± 24 of 4 0.64Down
Mated spermatheca102 ± 64 of 4 0.66Down
Adult carcass89 ± 54 of 4 0.60Down
Larval CNS135 ± 154 of 4 0.88None
Larval Salivary gland251 ± 104 of 4 1.63Up
Larval midgut99 ± 34 of 4 0.64Down
Larval tubule103 ± 64 of 4 0.70Down
Larval hindgut107 ± 44 of 4 0.70Down
Larval fat body199 ± 154 of 4 1.30None
Larval trachea144 ± 104 of 4 0.94None
Larval carcass121 ± 64 of 4 0.78Down
S2 cells (growing)234 ± 94 of 4 1.52Up
Whole fly154 ± 54 of 4

Looking for CG17785-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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