FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17829-RA through 18771 annotations produced 1 hits

(CG17829):

Annotation Number : CG17829
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025635
Gbrowse : chrX:519587-522055 (+) // 99.82 //
Probeset : 1628960_s_at
Accessions : protein= NP_652054; /// NP_726684; /// NP_726685;, nucleotide= NM_143797; /// NM_166851; /// NM_166852;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0025635.
BDGP gene expression has embryonic in situ data for EG:115C2.6: 9 pix of staining in 4 body parts.
Homophila reports that CG17829 is a close match (5e-11) to human gene MRX89;ZNF41 (NP_700359), a gene associated with Mental retardation, X-linked-89 (3).
BioGrid reports that CG17829 interacts with CG7101 CG7417 CG8301 CG2045 CG2120 CG2865 CG3724 CG5930 CG7533 CG7619 CG9653 Dmel CG14425 .
TRiP has 1 RNAi stocks for FBgn0025635 available for purchase.
VDRC has 2 RNAi stocks for FBgn0025635 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	102 ± 3	4 of 4	0.60	Down
Head	58 ± 2	4 of 4	0.30	Down
Eye	46 ± 2	4 of 4	0.27	Down
Thoracicoabdominal ganglion	101 ± 1	4 of 4	0.60	Down
Salivary gland	85 ± 11	4 of 4	0.49	Down
Crop	68 ± 1	4 of 4	0.40	Down
Midgut	76 ± 1	4 of 4	0.40	Down
Tubule	75 ± 2	4 of 4	0.40	Down
Hindgut	54 ± 1	4 of 4	0.30	Down
Heart	38 ± 1	4 of 4	0.23	Down
Fat body	92 ± 4	4 of 4	0.54	Down
Ovary	452 ± 4	4 of 4	2.60	Up
Testis	24 ± 0	4 of 4	0.10	Down
Male accessory glands	187 ± 11	4 of 4	1.10	None
Virgin spermatheca	74 ± 2	4 of 4	0.43	Down
Mated spermatheca	85 ± 2	4 of 4	0.49	Down
Adult carcass	65 ± 5	4 of 4	0.40	Down
Larval CNS	188 ± 7	4 of 4	1.09	Up
Larval Salivary gland	150 ± 6	4 of 4	0.88	Down
Larval midgut	72 ± 3	4 of 4	0.42	Down
Larval tubule	84 ± 5	4 of 4	0.50	Down
Larval hindgut	85 ± 1	4 of 4	0.49	Down
Larval fat body	86 ± 5	4 of 4	0.50	Down
Larval trachea	75 ± 4	4 of 4	0.44	Down
Larval carcass	88 ± 3	4 of 4	0.51	Down
S2 cells (growing)	85 ± 0	4 of 4	0.50	Down
Whole fly	172 ± 3	4 of 4

Looking for CG17829-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720