Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1786-RA through 18771 annotations produced 1 hits



Cyp318a1 (Cyp318a1):

Annotation Number : CG1786
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030369
Gbrowse : chrX:11926664-11929316 (+) // 100.0 //
Probeset : 1634297_at
Accessions : protein= NP_727590;, nucleotide= NM_167318;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0030369.
Homophila reports that CG1786 is a close match (2e-11) to human gene CYP5;GHOSAL;TBXAS1 (NP_001052), a gene associated with Ghosal syndrome, 231095 (3);Thromboxane synthase deficiency (2).
VDRC has 2 RNAi stocks for FBgn0030369 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 01 of 4 0.30Down
Head13 14 of 4 1.10None
Eye13 14 of 4 1.11None
Thoracicoabdominal ganglion3 10 of 4 0.30Down
Salivary gland22 32 of 4 1.80None
Crop16 14 of 4 1.30None
Midgut20 04 of 4 1.70Up
Tubule21 24 of 4 1.80Up
Hindgut67 34 of 4 5.50Up
Heart19 24 of 4 1.57Up
Fat body40 84 of 4 3.33Up
Ovary4 02 of 4 0.30Down
Testis10 04 of 4 0.80None
Male accessory glands23 24 of 4 1.90Up
Virgin spermatheca21 44 of 4 1.71None
Mated spermatheca24 34 of 4 1.99Up
Adult carcass39 34 of 4 3.20Up
Larval CNS6 23 of 4 0.54Down
Larval Salivary gland3 10 of 4 0.28Down
Larval midgut37 34 of 4 3.03Up
Larval tubule9 12 of 4 0.80None
Larval hindgut35 24 of 4 2.87Up
Larval fat body9 21 of 4 0.80None
Larval trachea272 654 of 422.20Up
Larval carcass23 54 of 4 1.91None
S2 cells (growing)1 00 of 4 0.12Down
Whole fly12 13 of 4

Looking for CG1786-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime