FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17943-RA through 18771 annotations produced 1 hits

commissureless (comm):

Annotation Number : CG17943
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010105
Gbrowse : chr3L:15715423-15721523 (-) // 100.0 //
Probeset : 1636089_at
Accessions : protein= NP_524095;, nucleotide= NM_079371;
Pathway : 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay //
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0050699 // WW domain binding // inferred from direc
FlyMine data for FBgn0010105.
BDGP gene expression has embryonic in situ data for comm: 48 pix of staining in 26 body parts.
BioGrid reports that CG17943 interacts with CG3395 CG15112 CG12559 CG5123 CG1817 CG13521 CG13521 CG7555 CG7555 CG10975 .
TRiP has 1 RNAi stocks for FBgn0010105 available for purchase.
VDRC has 3 RNAi stocks for FBgn0010105 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	186 ± 5	4 of 4	3.50	Up
Head	125 ± 6	4 of 4	2.30	Up
Eye	173 ± 4	4 of 4	3.24	Up
Thoracicoabdominal ganglion	143 ± 6	4 of 4	2.70	Up
Salivary gland	389 ± 28	4 of 4	7.28	Up
Crop	768 ± 36	4 of 4	14.40	Up
Midgut	45 ± 1	4 of 4	0.80	Down
Tubule	60 ± 9	4 of 4	1.10	None
Hindgut	246 ± 3	4 of 4	4.60	Up
Heart	90 ± 1	4 of 4	1.69	Up
Fat body	61 ± 11	4 of 4	1.15	None
Ovary	5 ± 0	0 of 4	0.10	Down
Testis	18 ± 1	4 of 4	0.30	Down
Male accessory glands	47 ± 4	4 of 4	0.90	None
Virgin spermatheca	64 ± 5	4 of 4	1.20	None
Mated spermatheca	47 ± 6	1 of 4	0.89	None
Adult carcass	73 ± 7	4 of 4	1.40	None
Larval CNS	162 ± 7	4 of 4	3.03	Up
Larval Salivary gland	341 ± 9	4 of 4	6.39	Up
Larval midgut	37 ± 4	4 of 4	0.69	Down
Larval tubule	201 ± 7	4 of 4	3.80	Up
Larval hindgut	140 ± 2	4 of 4	2.63	Up
Larval fat body	20 ± 3	2 of 4	0.40	Down
Larval trachea	65 ± 9	4 of 4	1.22	None
Larval carcass	59 ± 4	4 of 4	1.11	None
S2 cells (growing)	10 ± 1	0 of 4	0.20	Down
Whole fly	53 ± 2	4 of 4

Looking for CG17943-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720