FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1796-RA through 18771 annotations produced 1 hits

Transport and Golgi organization 4 (Tango4):

Annotation Number : CG1796
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030365
Gbrowse : chrX:11915096-11916781 (+) // 100.0 //
Probeset : 1625006_at
Accessions : protein= NP_572778;, nucleotide= NM_132550;
Pathway : via spliceosome // inferred by curator /// 0007030 // Golgi organization // inferred from mutant phenotype"
Interpro : 0005829 // cytosol // inferred from direct assay /// 0071011 // precatalytic spliceosome // inferred from direct assay /
FlyMine data for FBgn0030365.
Homophila reports that CG1796 is a close match (9e-13) to human gene CFEOM1;FEOM1;KIAA1708;KIF21A (NP_060111), a gene associated with Fibrosis of extraocular muscles, congenital, 1, 135700 (3).
BioGrid reports that CG1796 interacts with CG7954 .
VDRC has 2 RNAi stocks for FBgn0030365 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 3	4 of 4	0.70	Down
Head	64 ± 4	4 of 4	0.50	Down
Eye	76 ± 2	4 of 4	0.59	Down
Thoracicoabdominal ganglion	77 ± 4	4 of 4	0.60	Down
Salivary gland	89 ± 15	4 of 4	0.68	None
Crop	79 ± 2	4 of 4	0.60	Down
Midgut	50 ± 4	4 of 4	0.40	Down
Tubule	71 ± 4	4 of 4	0.50	Down
Hindgut	60 ± 2	4 of 4	0.50	Down
Heart	55 ± 4	4 of 4	0.43	Down
Fat body	66 ± 5	4 of 4	0.51	Down
Ovary	266 ± 10	4 of 4	2.00	Up
Testis	21 ± 1	4 of 4	0.20	Down
Male accessory glands	77 ± 4	4 of 4	0.60	Down
Virgin spermatheca	78 ± 3	4 of 4	0.60	Down
Mated spermatheca	92 ± 4	4 of 4	0.71	Down
Adult carcass	80 ± 11	4 of 4	0.60	Down
Larval CNS	223 ± 13	4 of 4	1.72	Up
Larval Salivary gland	104 ± 5	4 of 4	0.80	Down
Larval midgut	51 ± 5	4 of 4	0.40	Down
Larval tubule	87 ± 3	4 of 4	0.70	Down
Larval hindgut	64 ± 1	4 of 4	0.49	Down
Larval fat body	166 ± 29	4 of 4	1.30	None
Larval trachea	136 ± 18	4 of 4	1.04	None
Larval carcass	81 ± 5	4 of 4	0.62	Down
S2 cells (growing)	125 ± 2	4 of 4	0.96	None
Whole fly	130 ± 6	4 of 4

Looking for CG1796-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720