FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG17960-RA through 18771 annotations produced 1 hits

RhoGAP1A (RhoGAP1A):

Annotation Number : CG17960
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025836
Gbrowse : chrX:34131-36730 (+) // 100.0 //
Probeset : 1628462_s_at
Accessions : protein= NP_001096855; /// NP_001096856; /// NP_001162626;, nucleotide= NM_001103385; /// NM_001103386; /// NM_001169155;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase a
FlyMine data for FBgn0025836.
BDGP gene expression has embryonic in situ data for RhoGAP1A: 13 pix of staining in 9 body parts.
TRiP has 1 RNAi stocks for FBgn0025836 available for purchase.
VDRC has 6 RNAi stocks for FBgn0025836 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	313 ± 7	4 of 4	1.50	Up
Head	157 ± 5	4 of 4	0.80	Down
Eye	108 ± 4	4 of 4	0.53	Down
Thoracicoabdominal ganglion	319 ± 17	4 of 4	1.60	Up
Salivary gland	253 ± 10	4 of 4	1.24	Up
Crop	396 ± 3	4 of 4	1.90	Up
Midgut	665 ± 22	4 of 4	3.30	Up
Tubule	518 ± 9	4 of 4	2.50	Up
Hindgut	270 ± 8	4 of 4	1.30	Up
Heart	182 ± 7	4 of 4	0.90	None
Fat body	123 ± 10	4 of 4	0.60	Down
Ovary	432 ± 4	4 of 4	2.10	Up
Testis	29 ± 2	4 of 4	0.10	Down
Male accessory glands	161 ± 9	4 of 4	0.80	Down
Virgin spermatheca	145 ± 13	4 of 4	0.71	Down
Mated spermatheca	159 ± 7	4 of 4	0.78	Down
Adult carcass	136 ± 14	4 of 4	0.70	Down
Larval CNS	302 ± 21	4 of 4	1.48	Up
Larval Salivary gland	187 ± 7	4 of 4	0.92	None
Larval midgut	427 ± 19	4 of 4	2.09	Up
Larval tubule	431 ± 6	4 of 4	2.10	Up
Larval hindgut	301 ± 7	4 of 4	1.48	Up
Larval fat body	165 ± 13	4 of 4	0.80	None
Larval trachea	224 ± 13	4 of 4	1.10	None
Larval carcass	201 ± 11	4 of 4	0.99	None
S2 cells (growing)	2 ± 0	0 of 4	0.01	Down
Whole fly	204 ± 11	4 of 4

Looking for CG17960-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720