FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG18001-RA through 18771 annotations produced 1 hits

"Enhancer on chromosome 2 ( complementation group b"):

Annotation Number : CG18001
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr2R:403501-403961 (-) // 100.0 //
Probeset : 1629984_s_at
Accessions : protein= , nucleotide= NP_001036440;
Pathway : 0006412 // translation // inferred from sequence or structural similarity /// 0006412 // translation // inferred from el
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
FlyMine data for full length.
BioGrid reports that CG18001 interacts with CG4394 CG4697 CG4810 CG3924 CG3936 CG3936 CG11387 CG8118 CG3830 CG1849 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3228 ± 85	4 of 4	0.80	None
Head	4684 ± 222	4 of 4	1.20	None
Eye	6719 ± 61	4 of 4	1.66	Up
Thoracicoabdominal ganglion	4732 ± 123	4 of 4	1.20	None
Salivary gland	9524 ± 512	4 of 4	2.36	Up
Crop	6387 ± 385	4 of 4	1.60	Up
Midgut	5853 ± 74	4 of 4	1.40	Up
Tubule	6982 ± 147	4 of 4	1.70	Up
Hindgut	5325 ± 96	4 of 4	1.30	Up
Heart	6518 ± 353	4 of 4	1.61	Up
Fat body	6481 ± 703	4 of 4	1.60	Up
Ovary	3613 ± 90	4 of 4	0.90	None
Testis	1183 ± 37	4 of 4	0.30	Down
Male accessory glands	9824 ± 148	4 of 4	2.40	Up
Virgin spermatheca	6488 ± 277	4 of 4	1.61	Up
Mated spermatheca	6962 ± 186	4 of 4	1.72	Up
Adult carcass	5731 ± 308	4 of 4	1.40	Up
Larval CNS	3110 ± 170	4 of 4	0.77	Down
Larval Salivary gland	8438 ± 366	4 of 4	2.09	Up
Larval midgut	5609 ± 154	4 of 4	1.39	Up
Larval tubule	5752 ± 84	4 of 4	1.40	Up
Larval hindgut	5070 ± 89	4 of 4	1.25	Up
Larval fat body	7701 ± 917	4 of 4	1.90	Up
Larval trachea	6143 ± 113	4 of 4	1.52	Up
Larval carcass	5441 ± 354	4 of 4	1.35	Up
S2 cells (growing)	4832 ± 80	4 of 4	1.20	Up
Whole fly	4041 ± 232	4 of 4

Looking for CG18001-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720