Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG18012-RA through 18771 annotations produced 1 hits



chr3R:13635116-13636854 (-) // 100.0 // ():

Annotation Number : CG18012
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1638157_at
Accessions : protein= , nucleotide= NP_650662;
Pathway : 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0009058 // biosynthetic process
FlyMine data for full length.
Homophila reports that CG18012 is a close match (7e-102) to human gene ALG1;HMAT1;HMT1 (NP_061982), a gene associated with Congenital disorder of glycosylation, type Ik, 608540 (3).
BioGrid reports that CG18012 interacts with CG7025 CG3668 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain86 54 of 4 0.40Down
Head201 64 of 4 0.90None
Eye181 104 of 4 0.84Down
Thoracicoabdominal ganglion98 34 of 4 0.50Down
Salivary gland359 124 of 4 1.67Up
Crop242 34 of 4 1.10Up
Midgut295 114 of 4 1.40Up
Tubule175 104 of 4 0.80Down
Hindgut203 54 of 4 0.90None
Heart308 134 of 4 1.43Up
Fat body407 314 of 4 1.89Up
Ovary291 64 of 4 1.40Up
Testis52 34 of 4 0.20Down
Male accessory glands731 194 of 4 3.40Up
Virgin spermatheca775 114 of 4 3.59Up
Mated spermatheca761 184 of 4 3.53Up
Adult carcass228 194 of 4 1.10None
Larval CNS133 104 of 4 0.62Down
Larval Salivary gland362 204 of 4 1.68Up
Larval midgut267 84 of 4 1.24Up
Larval tubule140 64 of 4 0.70Down
Larval hindgut209 144 of 4 0.97None
Larval fat body228 184 of 4 1.10None
Larval trachea293 424 of 4 1.36Up
Larval carcass144 24 of 4 0.67Down
S2 cells (growing)406 114 of 4 1.88Up
Whole fly215 54 of 4

Looking for CG18012-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime