Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG18155-RA through 18771 annotations produced 1 hits



(CG18155):

Annotation Number : CG18155
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029945
Gbrowse : chrX:7223592-7225188 (+) // 100.0 //
Probeset : 1639191_at
Accessions : protein= NP_996360;, nucleotide= NM_206637;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase act
FlyMine data for FBgn0029945.
VDRC has 3 RNAi stocks for FBgn0029945 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 10 of 4 0.10Down
Head2 10 of 4 0.10Down
Eye3 00 of 4 0.08Down
Thoracicoabdominal ganglion5 10 of 4 0.10Down
Salivary gland13 30 of 4 0.30Down
Crop7 30 of 4 0.20Down
Midgut4 00 of 4 0.10Down
Tubule14 12 of 4 0.30Down
Hindgut4 10 of 4 0.10Down
Heart2 00 of 4 0.05Down
Fat body10 50 of 4 0.22Down
Ovary5 00 of 4 0.10Down
Testis655 174 of 414.40Up
Male accessory glands5 10 of 4 0.10Down
Virgin spermatheca10 21 of 4 0.23Down
Mated spermatheca14 22 of 4 0.32Down
Adult carcass2 00 of 4 0.10Down
Larval CNS11 44 of 4 0.26Down
Larval Salivary gland11 30 of 4 0.26Down
Larval midgut6 00 of 4 0.13Down
Larval tubule18 24 of 4 0.40Down
Larval hindgut8 20 of 4 0.17Down
Larval fat body62 313 of 4 1.40None
Larval trachea16 14 of 4 0.36Down
Larval carcass9 00 of 4 0.20Down
S2 cells (growing)15 13 of 4 0.35Down
Whole fly45 24 of 4

Looking for CG18155-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime