FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG18279-RB through 18771 annotations produced 2 hits

Immune induced molecule 10 (IM10):

Annotation Number : CG18279
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053470
Gbrowse : chrUextra:268560-269913 (+) // 100.0 // /// chr2R:9294510-9295863 (+) // 100.0 // /// chr2R:9299237-9300590 (+) // 100.0 //
Probeset : 1626319_a_at
Accessions : protein= NP_725287; /// NP_725288;, nucleotide= NM_165981; /// NM_165982;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
FlyMine data for FBgn0053470.
BioGrid reports that CG18279 interacts with CG32772 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	27 ± 1	4 of 4	0.10	None
Head	1056 ± 115	4 of 4	4.00	Up
Eye	622 ± 73	4 of 4	2.35	Up
Thoracicoabdominal ganglion	27 ± 3	4 of 4	0.10	None
Salivary gland	17 ± 6	2 of 4	0.07	None
Crop	2188 ± 97	4 of 4	8.30	Up
Midgut	3 ± 1	0 of 4	0.00	None
Tubule	165 ± 77	3 of 4	0.60	None
Hindgut	243 ± 24	4 of 4	0.90	None
Heart	680 ± 79	4 of 4	2.57	Up
Fat body	990 ± 414	4 of 4	3.75	Up
Ovary	20 ± 0	4 of 4	0.10	None
Testis	4 ± 1	1 of 4	0.00	None
Male accessory glands	6 ± 2	1 of 4	0.00	None
Virgin spermatheca	4334 ± 212	4 of 4	16.39	Up
Mated spermatheca	2571 ± 654	4 of 4	9.73	Up
Adult carcass	750 ± 83	4 of 4	2.80	Up
Larval CNS	9 ± 1	4 of 4	0.04	None
Larval Salivary gland	5 ± 2	1 of 4	0.02	None
Larval midgut	4 ± 1	1 of 4	0.02	None
Larval tubule	5 ± 1	0 of 4	0.00	None
Larval hindgut	20 ± 1	4 of 4	0.08	None
Larval fat body	512 ± 129	4 of 4	1.90	None
Larval trachea	20 ± 14	4 of 4	0.08	None
Larval carcass	14 ± 1	3 of 4	0.06	None
S2 cells (growing)	12 ± 0	4 of 4	0.05	None
Whole fly	264 ± 94	4 of 4

/// Immune induced molecule 10 (CG33470 /// IM10):

Annotation Number : Stencil:2R:8476483:8477383:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033835 /// FBgn0053470
Gbrowse : chr2R:9299274-9300174 (+) // 100.0 // /// chr2R:9294547-9295447 (+) // 100.0 // /// chrUextra:268597-269497 (+) // 100.0 //
Probeset : 1639019_s_at
Accessions : protein= NP_725287; /// NP_725288; /// NP_995829; /// NP_995830;, nucleotide= NM_165981; /// NM_165982; /// NM_206107; /// NM_206108;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
FlyMine data for FBgn0033835 /// FBgn0053470.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	74 ± 3	4 of 4	0.20	Down
Head	1625 ± 21	4 of 4	4.30	Up
Eye	1421 ± 202	4 of 4	3.80	Up
Thoracicoabdominal ganglion	40 ± 7	4 of 4	0.10	Down
Salivary gland	55 ± 8	4 of 4	0.15	Down
Crop	2377 ± 68	4 of 4	6.30	Up
Midgut	8 ± 2	1 of 4	0.00	Down
Tubule	162 ± 69	4 of 4	0.40	Down
Hindgut	748 ± 38	4 of 4	2.00	Up
Heart	1875 ± 266	4 of 4	5.01	Up
Fat body	3277 ± 356	4 of 4	8.75	Up
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	3 ± 1	2 of 4	0.00	Down
Male accessory glands	10 ± 3	2 of 4	0.00	Down
Virgin spermatheca	3540 ± 209	4 of 4	9.45	Up
Mated spermatheca	2058 ± 467	4 of 4	5.50	Up
Adult carcass	2275 ± 168	4 of 4	6.10	Up
Larval CNS	9 ± 4	4 of 4	0.02	Down
Larval Salivary gland	7 ± 3	1 of 4	0.02	Down
Larval midgut	8 ± 2	1 of 4	0.02	Down
Larval tubule	4 ± 1	0 of 4	0.00	Down
Larval hindgut	38 ± 11	4 of 4	0.10	Down
Larval fat body	667 ± 148	4 of 4	1.80	None
Larval trachea	15 ± 26	1 of 4	0.04	Down
Larval carcass	12 ± 3	3 of 4	0.03	Down
S2 cells (growing)	1 ± 0	0 of 4	0.00	Down
Whole fly	374 ± 49	4 of 4

Looking for CG18279-RB. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720