Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG18335-RA through 18771 annotations produced 1 hits



(CG18335):

Annotation Number : CG18335
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033610
Gbrowse : chr2R:7177362-7178543 (-) // 100.0 //
Probeset : 1637854_at
Accessions : protein= NP_610666;, nucleotide= NM_136822;
FlyMine data for FBgn0033610.
VDRC has 3 RNAi stocks for FBgn0033610 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.00Down
Head2 10 of 4 0.00Down
Eye1 10 of 4 0.02Down
Thoracicoabdominal ganglion2 10 of 4 0.00Down
Salivary gland2 00 of 4 0.04Down
Crop1 00 of 4 0.00Down
Midgut2 10 of 4 0.00Down
Tubule6 10 of 4 0.10Down
Hindgut6 20 of 4 0.10Down
Heart1 00 of 4 0.02Down
Fat body5 30 of 4 0.07Down
Ovary1 00 of 4 0.00Down
Testis931 544 of 412.50Up
Male accessory glands1 00 of 4 0.00Down
Virgin spermatheca3 10 of 4 0.05Down
Mated spermatheca1 00 of 4 0.01Down
Adult carcass3 10 of 4 0.10Down
Larval CNS2 10 of 4 0.03Down
Larval Salivary gland1 00 of 4 0.02Down
Larval midgut2 10 of 4 0.04Down
Larval tubule4 20 of 4 0.10Down
Larval hindgut1 00 of 4 0.01Down
Larval fat body75 373 of 4 1.00None
Larval trachea4 50 of 4 0.06Down
Larval carcass1 00 of 4 0.02Down
S2 cells (growing)1 00 of 4 0.03Down
Whole fly74 44 of 4

Looking for CG18335-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime