Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG18361-RA through 18771 annotations produced 1 hits



disshevelled (dsh):

Annotation Number : CG18361
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000499
Gbrowse : chrX:11249913-11252759 (+) // 100.0 //
Probeset : 1628788_a_at
Accessions : protein= NP_511118; /// NP_727517;, nucleotide= NM_078563; /// NM_167279;
Pathway : elongation of leading edge cells // inferred from mutant phenotype /// 0007423 // sensory organ development // non-trac
Interpro : open tracheal system // inferred from mutant phenotype /// 0035309 // wing and notum subfield formation // inferred fro
FlyMine data for FBgn0000499.
BioGrid reports that CG18361 interacts with CG11579 CG11579 CG5912 CG5680 CG5680 CG5680 CG7595 CG3619 CG7926 CG7926 CG14548 CG2275 CG10701 CG3936 CG3936 CG3936 CG3936 CG2248 CG8416 CG8416 CG3929 CG4114 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG17697 CG4353 CG4353 CG4353 CG16993 CG8118 CG16973 CG11614 CG11614 CG11614 CG11614 CG11084 CG11084 CG11084 CG11084 CG9774 CG9774 CG10072 CG3595 CG3595 CG4889 CG4889 CG4889 CG4889 CG4889 CG4889 CG4889 CG4889 CG4889 CG4889 CG15792 .
TRiP has 2 RNAi stocks for FBgn0000499 available for purchase.
VDRC has 1 RNAi stocks for FBgn0000499 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain215 ± 64 of 4 2.60Up
Head78 ± 34 of 4 0.90None
Eye109 ± 84 of 4 1.33None
Thoracicoabdominal ganglion119 ± 44 of 4 1.40Up
Salivary gland66 ± 24 of 4 0.80None
Crop81 ± 54 of 4 1.00None
Midgut29 ± 14 of 4 0.40Down
Tubule64 ± 24 of 4 0.80Down
Hindgut50 ± 44 of 4 0.60Down
Heart45 ± 04 of 4 0.55Down
Fat body29 ± 54 of 4 0.36Down
Ovary165 ± 54 of 4 2.00Up
Testis30 ± 14 of 4 0.40Down
Male accessory glands60 ± 44 of 4 0.70None
Virgin spermatheca69 ± 84 of 4 0.84None
Mated spermatheca97 ± 24 of 4 1.18None
Adult carcass51 ± 54 of 4 0.60Down
Larval CNS263 ± 354 of 4 3.19Up
Larval Salivary gland73 ± 64 of 4 0.88None
Larval midgut29 ± 24 of 4 0.36Down
Larval tubule53 ± 14 of 4 0.60Down
Larval hindgut54 ± 34 of 4 0.65Down
Larval fat body28 ± 04 of 4 0.30Down
Larval trachea53 ± 54 of 4 0.64Down
Larval carcass62 ± 44 of 4 0.75None
S2 cells (growing)80 ± 54 of 4 0.97None
Whole fly82 ± 84 of 4

Looking for CG18361-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime