FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG18362-RB through 18771 annotations produced 1 hits

Mlx interactor (Mio):

Annotation Number : CG18362
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032940
Gbrowse : chr2L:21286077-21310006 (-) // 100.0 //
Probeset : 1628873_s_at
Accessions : protein= NP_001163032; /// NP_001163033; /// NP_001163034; /// NP_001163035; /// NP_001163036; /// NP_001163037; /// NP_001163038; /// NP_001163039; /// NP_610105; /// NP_724325; /// NP_724326; /// NP_724327; /// NP_724328;, nucleotide= NM_001169561; /// NM_001169562; /// NM_001169563; /// NM_001169564; /// NM_001169565; /// NM_001169566; /// NM_001169567; /// NM_001169568; /// NM_136261; /// NM_165366; /// NM_165367; /// NM_165368; /// NM_165369;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0032940.
BDGP gene expression has embryonic in situ data for Mio: 22 pix of staining in 10 body parts.
BioGrid reports that CG18362 interacts with CG3350 CG2216 CG4071 CG6569 CG8614 .
TRiP has 1 RNAi stocks for FBgn0032940 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032940 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	266 ± 7	4 of 4	1.00	None
Head	247 ± 14	4 of 4	0.90	None
Eye	258 ± 13	4 of 4	0.99	None
Thoracicoabdominal ganglion	242 ± 1	4 of 4	0.90	None
Salivary gland	343 ± 12	4 of 4	1.32	Up
Crop	254 ± 7	4 of 4	1.00	None
Midgut	209 ± 8	4 of 4	0.80	Down
Tubule	1592 ± 66	4 of 4	6.10	Up
Hindgut	196 ± 5	4 of 4	0.80	Down
Heart	473 ± 19	4 of 4	1.82	Up
Fat body	786 ± 31	4 of 4	3.02	Up
Ovary	350 ± 7	4 of 4	1.30	Up
Testis	98 ± 4	4 of 4	0.40	Down
Male accessory glands	539 ± 19	4 of 4	2.10	Up
Virgin spermatheca	861 ± 59	4 of 4	3.31	Up
Mated spermatheca	666 ± 22	4 of 4	2.56	Up
Adult carcass	475 ± 12	4 of 4	1.80	Up
Larval CNS	205 ± 4	4 of 4	0.79	Down
Larval Salivary gland	298 ± 9	4 of 4	1.14	None
Larval midgut	402 ± 18	4 of 4	1.55	Up
Larval tubule	628 ± 31	4 of 4	2.40	Up
Larval hindgut	144 ± 7	4 of 4	0.56	Down
Larval fat body	546 ± 37	4 of 4	2.10	Up
Larval trachea	215 ± 21	4 of 4	0.83	Down
Larval carcass	159 ± 5	4 of 4	0.61	Down
S2 cells (growing)	386 ± 5	4 of 4	1.48	Up
Whole fly	260 ± 12	4 of 4

Looking for CG18362-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720