FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG18408-RI through 18771 annotations produced 1 hits

CAP (CAP):

Annotation Number : CG18408
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033504
Gbrowse : chr2R:6156527-6194529 (+) // 99.85 //
Probeset : 1633353_s_at
Accessions : protein= NP_001137636; /// NP_001137637; /// NP_001137638; /// NP_001137639; /// NP_001137640; /// NP_001137641; /// NP_001163110; /// NP_610570; /// NP_610571; /// NP_610572; /// NP_724910; /// NP_724911; /// NP_724912; /// NP_724913; /// NP_724914; /// NP_724915; /// NP_995795;, nucleotide= NM_001144164; /// NM_001144165; /// NM_001144166; /// NM_001144167; /// NM_001144168; /// NM_001144169; /// NM_001169639; /// NM_136726; /// NM_136727; /// NM_136728; /// NM_165757; /// NM_165758; /// NM_165759; /// NM_165760; /// NM_165761; /// NM_165762; /// NM_206073;
Pathway : 0005925 // focal adhesion // inferred from sequence or structural similarity
Interpro : 0017166 // vinculin binding // inferred from sequence or structural similarity
FlyMine data for FBgn0033504.
BDGP gene expression has embryonic in situ data for rexin: 14 pix of staining in 8 body parts.
BioGrid reports that CG18408 interacts with CG3299 CG32514 CG3780 CG9379 .
TRiP has 3 RNAi stocks for FBgn0033504 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033504 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	302 ± 9	4 of 4	0.70	Down
Head	766 ± 29	4 of 4	1.90	Up
Eye	1256 ± 130	4 of 4	3.08	Up
Thoracicoabdominal ganglion	406 ± 19	4 of 4	1.00	None
Salivary gland	3110 ± 21	4 of 4	7.63	Up
Crop	2047 ± 79	4 of 4	5.00	Up
Midgut	544 ± 8	4 of 4	1.30	Up
Tubule	685 ± 42	4 of 4	1.70	Up
Hindgut	1361 ± 40	4 of 4	3.30	Up
Heart	918 ± 51	4 of 4	2.25	Up
Fat body	817 ± 133	4 of 4	2.01	Up
Ovary	135 ± 4	4 of 4	0.30	Down
Testis	168 ± 8	4 of 4	0.40	Down
Male accessory glands	905 ± 48	4 of 4	2.20	Up
Virgin spermatheca	402 ± 52	4 of 4	0.99	None
Mated spermatheca	575 ± 63	4 of 4	1.41	None
Adult carcass	915 ± 48	4 of 4	2.20	Up
Larval CNS	395 ± 22	4 of 4	0.97	None
Larval Salivary gland	111 ± 16	4 of 4	0.27	Down
Larval midgut	760 ± 25	4 of 4	1.87	Up
Larval tubule	262 ± 8	4 of 4	0.60	Down
Larval hindgut	1294 ± 74	4 of 4	3.18	Up
Larval fat body	688 ± 72	4 of 4	1.70	Up
Larval trachea	162 ± 55	4 of 4	0.40	Down
Larval carcass	1435 ± 135	4 of 4	3.52	Up
S2 cells (growing)	755 ± 12	4 of 4	1.85	Up
Whole fly	407 ± 13	4 of 4

Looking for CG18408-RI. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720