FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG18543-RA through 18771 annotations produced 1 hits

matrimony (mtrm):

Annotation Number : CG18543
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010431
Gbrowse : chr3L:8406113-8407203 (+) // 100.0 //
Probeset : 1629445_at
Accessions : protein= NP_648223;, nucleotide= NM_139966;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //
Interpro : 0003677 // DNA binding // inferred from electronic annotation
FlyMine data for FBgn0010431.
BDGP gene expression has embryonic in situ data for CG18543: 4 pix of staining in 1 body parts.
BioGrid reports that CG18543 interacts with CG33130 .
TRiP has 1 RNAi stocks for FBgn0010431 available for purchase.
VDRC has 2 RNAi stocks for FBgn0010431 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 1	4 of 4	0.00	Down
Head	5 ± 1	0 of 4	0.00	Down
Eye	7 ± 0	4 of 4	0.01	Down
Thoracicoabdominal ganglion	12 ± 0	4 of 4	0.00	Down
Salivary gland	16 ± 5	3 of 4	0.01	Down
Crop	8 ± 1	1 of 4	0.00	Down
Midgut	6 ± 0	1 of 4	0.00	Down
Tubule	23 ± 10	2 of 4	0.00	Down
Hindgut	6 ± 0	2 of 4	0.00	Down
Heart	5 ± 1	1 of 4	0.00	Down
Fat body	23 ± 12	3 of 4	0.02	Down
Ovary	1947 ± 31	4 of 4	1.80	Up
Testis	29 ± 2	4 of 4	0.00	Down
Male accessory glands	11 ± 2	2 of 4	0.00	Down
Virgin spermatheca	30 ± 1	4 of 4	0.03	Down
Mated spermatheca	21 ± 6	3 of 4	0.02	Down
Adult carcass	44 ± 19	3 of 4	0.00	Down
Larval CNS	22 ± 7	4 of 4	0.02	Down
Larval Salivary gland	10 ± 0	0 of 4	0.01	Down
Larval midgut	4 ± 2	0 of 4	0.00	Down
Larval tubule	7 ± 1	1 of 4	0.00	Down
Larval hindgut	5 ± 0	1 of 4	0.00	Down
Larval fat body	7 ± 3	1 of 4	0.00	Down
Larval trachea	8 ± 4	3 of 4	0.01	Down
Larval carcass	5 ± 0	1 of 4	0.00	Down
S2 cells (growing)	3 ± 0	0 of 4	0.00	Down
Whole fly	1111 ± 32	4 of 4

Looking for CG18543-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720