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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG18548-RA through 18771 annotations produced 1 hits



Glutathione S transferase D10 (GstD10):

Annotation Number : CG18548
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042206
Gbrowse : chr3R:8190634-8191267 (-) // 100.0 //
Probeset : 1627890_at
Accessions : protein= NP_652713;, nucleotide= NM_144456;
Interpro : 0004364 // glutathione transferase activity // inferred from direct assay /// 0004364 // glutathione transferase activit
FlyMine data for FBgn0042206.
VDRC has 2 RNAi stocks for FBgn0042206 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 11 of 4 0.40Down
Head29 24 of 4 1.80Up
Eye28 34 of 4 1.72Up
Thoracicoabdominal ganglion4 00 of 4 0.30Down
Salivary gland13 30 of 4 0.82None
Crop106 94 of 4 6.50Up
Midgut213 184 of 413.00Up
Tubule19 33 of 4 1.20None
Hindgut18 14 of 4 1.10None
Heart8 12 of 4 0.51Down
Fat body16 13 of 4 0.97None
Ovary3 10 of 4 0.20Down
Testis33 14 of 4 2.00Up
Male accessory glands8 10 of 4 0.50Down
Virgin spermatheca42 24 of 4 2.57Up
Mated spermatheca39 24 of 4 2.40Up
Adult carcass11 30 of 4 0.70None
Larval CNS3 00 of 4 0.19Down
Larval Salivary gland42 14 of 4 2.55Up
Larval midgut81 134 of 4 4.94Up
Larval tubule181 124 of 411.00Up
Larval hindgut175 234 of 410.61Up
Larval fat body1604 3564 of 497.30Up
Larval trachea23 24 of 4 1.43Up
Larval carcass49 94 of 4 2.99Up
S2 cells (growing)17 14 of 4 1.05None
Whole fly16 14 of 4

Looking for CG18548-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime