FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG18780-RA through 18771 annotations produced 1 hits

Mediator complex subunit 20 (MED20):

Annotation Number : CG18780
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013531
Gbrowse : chr2L:8071808-8072844 (-) // 100.0 //
Probeset : 1641105_at
Accessions : protein= NP_524663;, nucleotide= NM_079924;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003713 // transcription coactivator activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase a
FlyMine data for FBgn0013531.
BioGrid reports that CG18780 interacts with CG3880 CG7957 CG7957 .
TRiP has 1 RNAi stocks for FBgn0013531 available for purchase.
VDRC has 2 RNAi stocks for FBgn0013531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	52 ± 2	4 of 4	0.60	Down
Head	43 ± 1	4 of 4	0.50	Down
Eye	25 ± 1	4 of 4	0.31	Down
Thoracicoabdominal ganglion	46 ± 3	4 of 4	0.60	Down
Salivary gland	32 ± 3	2 of 4	0.40	Down
Crop	50 ± 2	4 of 4	0.60	Down
Midgut	53 ± 0	4 of 4	0.70	Down
Tubule	39 ± 1	4 of 4	0.50	Down
Hindgut	60 ± 1	4 of 4	0.70	Down
Heart	25 ± 2	4 of 4	0.31	Down
Fat body	25 ± 7	4 of 4	0.31	Down
Ovary	163 ± 3	4 of 4	2.00	Up
Testis	70 ± 4	4 of 4	0.90	None
Male accessory glands	55 ± 3	4 of 4	0.70	Down
Virgin spermatheca	25 ± 1	4 of 4	0.32	Down
Mated spermatheca	32 ± 3	4 of 4	0.40	Down
Adult carcass	36 ± 0	4 of 4	0.40	Down
Larval CNS	120 ± 8	4 of 4	1.49	Up
Larval Salivary gland	51 ± 4	4 of 4	0.63	Down
Larval midgut	25 ± 2	4 of 4	0.31	Down
Larval tubule	65 ± 1	4 of 4	0.80	Down
Larval hindgut	36 ± 1	4 of 4	0.44	Down
Larval fat body	43 ± 0	4 of 4	0.50	Down
Larval trachea	55 ± 9	4 of 4	0.68	Down
Larval carcass	27 ± 2	4 of 4	0.34	Down
S2 cells (growing)	119 ± 3	4 of 4	1.48	Up
Whole fly	81 ± 4	4 of 4

Looking for CG18780-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720