FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1938-RA through 18771 annotations produced 1 hits

dandelion clock (Dlic):

Annotation Number : CG1938
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030276
Gbrowse : chrX:11048433-11057245 (+) // 100.0 //
Probeset : 1638127_s_at
Accessions : protein= NP_572694; /// NP_727500; /// NP_727501; /// NP_727503;, nucleotide= NM_132466; /// NM_167273; /// NM_167274; /// NM_167276;
Pathway : 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0005868 // cytoplasmic dynein complex // inferre
Interpro : "0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred
FlyMine data for FBgn0030276.
BDGP gene expression has embryonic in situ data for Dlic2: 12 pix of staining in 4 body parts.
VDRC has 2 RNAi stocks for FBgn0030276 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	520 ± 3	4 of 4	1.80	Up
Head	260 ± 13	4 of 4	0.90	None
Eye	325 ± 5	4 of 4	1.13	Up
Thoracicoabdominal ganglion	618 ± 9	4 of 4	2.10	Up
Salivary gland	274 ± 65	4 of 4	0.95	None
Crop	528 ± 12	4 of 4	1.80	Up
Midgut	273 ± 3	4 of 4	0.90	None
Tubule	697 ± 11	4 of 4	2.40	Up
Hindgut	521 ± 6	4 of 4	1.80	Up
Heart	376 ± 10	4 of 4	1.31	Up
Fat body	281 ± 48	4 of 4	0.98	None
Ovary	495 ± 7	4 of 4	1.70	Up
Testis	65 ± 1	4 of 4	0.20	Down
Male accessory glands	175 ± 7	4 of 4	0.60	Down
Virgin spermatheca	502 ± 18	4 of 4	1.74	Up
Mated spermatheca	510 ± 36	4 of 4	1.77	Up
Adult carcass	277 ± 34	4 of 4	1.00	None
Larval CNS	366 ± 38	4 of 4	1.27	Up
Larval Salivary gland	407 ± 14	4 of 4	1.42	Up
Larval midgut	437 ± 23	4 of 4	1.52	Up
Larval tubule	513 ± 17	4 of 4	1.80	Up
Larval hindgut	612 ± 23	4 of 4	2.13	Up
Larval fat body	287 ± 15	4 of 4	1.00	None
Larval trachea	631 ± 37	4 of 4	2.19	Up
Larval carcass	373 ± 19	4 of 4	1.30	Up
S2 cells (growing)	198 ± 3	4 of 4	0.69	Down
Whole fly	288 ± 11	4 of 4

Looking for CG1938-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720