FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1956-RA through 18771 annotations produced 1 hits

Enhancer of faf (R):

Annotation Number : CG1956
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004636
Gbrowse : chr3L:1859113-1862234 (-) // 100.0 //
Probeset : 1632691_at
Accessions : protein= NP_476857;, nucleotide= NM_057509;
Pathway : cell extension // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from mutant phenotype /// 000
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
FlyMine data for FBgn0004636.
Homophila reports that CG1956 is a close match (1e-12) to human gene RAC2 (NP_002863), a gene associated with Neutrophil immunodeficiency syndrome, 608203 (3).
BioGrid reports that CG1956 interacts with CG3126 CG33529 CG1772 CG1945 CG1945 .
TRiP has 2 RNAi stocks for FBgn0004636 available for purchase.
VDRC has 3 RNAi stocks for FBgn0004636 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	888 ± 20	4 of 4	1.90	Up
Head	626 ± 55	4 of 4	1.30	None
Eye	415 ± 19	4 of 4	0.89	None
Thoracicoabdominal ganglion	734 ± 24	4 of 4	1.60	Up
Salivary gland	631 ± 17	4 of 4	1.36	Up
Crop	1265 ± 55	4 of 4	2.70	Up
Midgut	761 ± 13	4 of 4	1.60	Up
Tubule	795 ± 19	4 of 4	1.70	Up
Hindgut	736 ± 10	4 of 4	1.60	Up
Heart	879 ± 41	4 of 4	1.89	Up
Fat body	839 ± 67	4 of 4	1.80	Up
Ovary	498 ± 17	4 of 4	1.10	None
Testis	153 ± 6	4 of 4	0.30	Down
Male accessory glands	771 ± 31	4 of 4	1.70	Up
Virgin spermatheca	1501 ± 29	4 of 4	3.22	Up
Mated spermatheca	1449 ± 25	4 of 4	3.11	Up
Adult carcass	634 ± 43	4 of 4	1.40	Up
Larval CNS	1354 ± 59	4 of 4	2.91	Up
Larval Salivary gland	839 ± 20	4 of 4	1.80	Up
Larval midgut	791 ± 37	4 of 4	1.70	Up
Larval tubule	1151 ± 34	4 of 4	2.50	Up
Larval hindgut	937 ± 12	4 of 4	2.01	Up
Larval fat body	1375 ± 92	4 of 4	3.00	Up
Larval trachea	1137 ± 75	4 of 4	2.44	Up
Larval carcass	624 ± 19	4 of 4	1.34	Up
S2 cells (growing)	1384 ± 5	4 of 4	2.97	Up
Whole fly	465 ± 27	4 of 4

Looking for CG1956-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720