FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2009-RA through 18771 annotations produced 1 hits

bip2 (bip2):

Annotation Number : CG2009
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026262
Gbrowse : chr4:480507-487450 (-) // 100.0 //
Probeset : 1639551_at
Accessions : protein= NP_651923;, nucleotide= NM_143666;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005669 // transcription factor TFIID complex // non-traceable auth
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0026262.
BDGP gene expression has embryonic in situ data for bip2: 9 pix of staining in 7 body parts.
BioGrid reports that CG2009 interacts with CG5738 CG2275 CG3217 CG4213 CG5393 CG6163 CG6660 CG6664 CG7574 CG9740 CG33261 Dmel CG17172 .
VDRC has 3 RNAi stocks for FBgn0026262 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	875 ± 23	4 of 4	2.70	Up
Head	337 ± 15	4 of 4	1.00	None
Eye	423 ± 10	4 of 4	1.31	Up
Thoracicoabdominal ganglion	755 ± 6	4 of 4	2.30	Up
Salivary gland	474 ± 9	4 of 4	1.47	Up
Crop	360 ± 12	4 of 4	1.10	Up
Midgut	284 ± 5	4 of 4	0.90	Down
Tubule	188 ± 4	4 of 4	0.60	Down
Hindgut	338 ± 10	4 of 4	1.00	None
Heart	381 ± 11	4 of 4	1.18	Up
Fat body	309 ± 17	4 of 4	0.96	None
Ovary	580 ± 21	4 of 4	1.80	Up
Testis	214 ± 3	4 of 4	0.70	Down
Male accessory glands	576 ± 20	4 of 4	1.80	Up
Virgin spermatheca	310 ± 10	4 of 4	0.96	None
Mated spermatheca	340 ± 15	4 of 4	1.05	None
Adult carcass	297 ± 8	4 of 4	0.90	None
Larval CNS	729 ± 24	4 of 4	2.26	Up
Larval Salivary gland	386 ± 20	4 of 4	1.20	None
Larval midgut	265 ± 6	4 of 4	0.82	Down
Larval tubule	345 ± 8	4 of 4	1.10	None
Larval hindgut	363 ± 5	4 of 4	1.13	Up
Larval fat body	277 ± 18	4 of 4	0.90	None
Larval trachea	717 ± 22	4 of 4	2.22	Up
Larval carcass	347 ± 9	4 of 4	1.07	None
S2 cells (growing)	375 ± 7	4 of 4	1.16	Up
Whole fly	323 ± 4	4 of 4

Looking for CG2009-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720