FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2028-RB through 18771 annotations produced 1 hits

Casein kinase Ialpha (CkIalpha):

Annotation Number : CG2028
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015024
Gbrowse : chrX:12547815-12551318 (+) // 100.0 //
Probeset : 1623403_s_at
Accessions : protein= NP_001162737; /// NP_511140; /// NP_727631; /// NP_727632;, nucleotide= NM_001169266; /// NM_078585; /// NM_167331; /// NM_167332;
Pathway : engulfment // inferred from mutant phenotype /// 0007224 // smoothened signaling pathway // traceable author statement
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 00057
FlyMine data for FBgn0015024.
BDGP gene expression has embryonic in situ data for CkIalpha: 8 pix of staining in 1 body parts.
Homophila reports that CG2028 is a close match (2e-40) to human gene SCA11;TTBK2 (NP_775771), a gene associated with Spinocerebellar ataxia-11, 604432 (3).
BioGrid reports that CG2028 interacts with CG32635 .
TRiP has 3 RNAi stocks for FBgn0015024 available for purchase.
VDRC has 2 RNAi stocks for FBgn0015024 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	789 ± 21	4 of 4	2.40	Up
Head	461 ± 31	4 of 4	1.40	Up
Eye	938 ± 31	4 of 4	2.87	Up
Thoracicoabdominal ganglion	669 ± 8	4 of 4	2.00	Up
Salivary gland	318 ± 19	4 of 4	0.97	None
Crop	525 ± 15	4 of 4	1.60	Up
Midgut	248 ± 13	4 of 4	0.80	Down
Tubule	358 ± 18	4 of 4	1.10	None
Hindgut	322 ± 27	4 of 4	1.00	None
Heart	625 ± 54	4 of 4	1.91	Up
Fat body	455 ± 103	4 of 4	1.39	None
Ovary	574 ± 13	4 of 4	1.80	Up
Testis	117 ± 8	4 of 4	0.40	Down
Male accessory glands	282 ± 13	4 of 4	0.90	None
Virgin spermatheca	753 ± 51	4 of 4	2.30	Up
Mated spermatheca	634 ± 33	4 of 4	1.94	Up
Adult carcass	219 ± 13	4 of 4	0.70	Down
Larval CNS	592 ± 126	4 of 4	1.81	Up
Larval Salivary gland	376 ± 38	4 of 4	1.15	None
Larval midgut	334 ± 22	4 of 4	1.02	None
Larval tubule	399 ± 18	4 of 4	1.20	None
Larval hindgut	416 ± 22	4 of 4	1.27	Up
Larval fat body	304 ± 22	4 of 4	0.90	None
Larval trachea	491 ± 35	4 of 4	1.50	Up
Larval carcass	378 ± 22	4 of 4	1.16	None
S2 cells (growing)	178 ± 6	4 of 4	0.55	Down
Whole fly	327 ± 23	4 of 4

Looking for CG2028-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720