FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2049-RB through 18771 annotations produced 1 hits

protein kinase c related (Pkn):

Annotation Number : CG2049
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020621
Gbrowse : chr2R:5141004-5172602 (-) // 100.0 //
Probeset : 1640417_a_at
Accessions : protein= NP_001097237; /// NP_001163095; /// NP_788290; /// NP_788291; /// NP_788292; /// NP_788293; /// NP_788294;, nucleotide= NM_001103767; /// NM_001169624; /// NM_176110; /// NM_176111; /// NM_176112; /// NM_176113; /// NM_176114;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0020621.
Homophila reports that CG2049 is a close match (7e-11) to human gene AUTS9;MET (NP_000236), a gene associated with Hepatocellular carcinoma, childhood type, 114550 (3);Renal cell carcinoma, papillary, familial and sporadic, 605074 (3);{Autism, suseptibility to, 9}, 611015 (3).
BioGrid reports that CG2049 interacts with CG5680 CG8416 .
TRiP has 3 RNAi stocks for FBgn0020621 available for purchase.
VDRC has 1 RNAi stocks for FBgn0020621 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	213 ± 5	4 of 4	1.20	Up
Head	583 ± 41	4 of 4	3.20	Up
Eye	1388 ± 59	4 of 4	7.63	Up
Thoracicoabdominal ganglion	190 ± 11	4 of 4	1.00	None
Salivary gland	399 ± 36	4 of 4	2.19	Up
Crop	237 ± 11	4 of 4	1.30	Up
Midgut	147 ± 6	4 of 4	0.80	Down
Tubule	117 ± 2	4 of 4	0.60	Down
Hindgut	128 ± 5	4 of 4	0.70	Down
Heart	167 ± 7	4 of 4	0.92	None
Fat body	243 ± 54	4 of 4	1.34	None
Ovary	261 ± 5	4 of 4	1.40	Up
Testis	32 ± 0	4 of 4	0.20	Down
Male accessory glands	102 ± 3	4 of 4	0.60	Down
Virgin spermatheca	113 ± 5	4 of 4	0.63	Down
Mated spermatheca	108 ± 2	4 of 4	0.60	Down
Adult carcass	201 ± 18	4 of 4	1.10	None
Larval CNS	122 ± 5	4 of 4	0.67	Down
Larval Salivary gland	105 ± 7	4 of 4	0.58	Down
Larval midgut	98 ± 3	4 of 4	0.54	Down
Larval tubule	200 ± 9	4 of 4	1.10	None
Larval hindgut	116 ± 2	4 of 4	0.64	Down
Larval fat body	114 ± 2	4 of 4	0.60	Down
Larval trachea	106 ± 31	4 of 4	0.59	Down
Larval carcass	357 ± 60	4 of 4	1.97	None
S2 cells (growing)	160 ± 2	4 of 4	0.88	None
Whole fly	181 ± 8	4 of 4

Looking for CG2049-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720