Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG2087-RA through 18771 annotations produced 1 hits



PEK (PEK):

Annotation Number : CG2087
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037327
Gbrowse : chr3R:1284284-1290472 (-) // 100.0 //
Probeset : 1641072_at
Accessions : protein= NP_649538;, nucleotide= NM_141281;
Pathway : 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-trace
FlyMine data for FBgn0037327.
BDGP gene expression has embryonic in situ data for PEK: 17 pix of staining in 6 body parts.
Homophila reports that CG2087 is a close match (9e-11) to human gene BEK;CFD1;FGFR2;JWS (NP_000132), a gene associated with Antley-Bixler syndrome, 207410 (;Apert syndrome, 101200 (3);Beare-Stevenson cutis gyrata syndrome, 123790 (3);Craniofacial-skeletal-dermatologic dysplasia (3);Craniosynostosis, nonspecific (3);Crouzon syndrome, 123500 (3);Gastric cancer, somatic, 137215 (3);Jackson-Weiss syndrome, 123150 (3);Pfeiffer syndrome, 101600 (3);Saethre-Chotzen syndrome, 101400 (3).
TRiP has 2 RNAi stocks for FBgn0037327 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037327 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain178 64 of 4 1.20None
Head111 74 of 4 0.80None
Eye148 44 of 4 1.04None
Thoracicoabdominal ganglion254 84 of 4 1.80Up
Salivary gland175 34 of 4 1.23None
Crop189 84 of 4 1.30Up
Midgut170 64 of 4 1.20None
Tubule233 34 of 4 1.60Up
Hindgut144 34 of 4 1.00None
Heart115 104 of 4 0.81None
Fat body150 174 of 4 1.05None
Ovary436 94 of 4 3.00Up
Testis33 04 of 4 0.20Down
Male accessory glands185 64 of 4 1.30Up
Virgin spermatheca188 74 of 4 1.31Up
Mated spermatheca201 74 of 4 1.41Up
Adult carcass88 34 of 4 0.60Down
Larval CNS352 244 of 4 2.46Up
Larval Salivary gland275 144 of 4 1.92Up
Larval midgut269 124 of 4 1.88Up
Larval tubule211 94 of 4 1.50Up
Larval hindgut241 134 of 4 1.68Up
Larval fat body78 64 of 4 0.50Down
Larval trachea217 94 of 4 1.52Up
Larval carcass208 134 of 4 1.46Up
S2 cells (growing)220 114 of 4 1.54Up
Whole fly143 114 of 4

Looking for CG2087-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime