FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2109-RA through 18771 annotations produced 1 hits

mitochondrial ribosomal protein L44 (mRpL44):

Annotation Number : CG2109
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037330
Gbrowse : chr3R:1295182-1296353 (-) // 100.0 //
Probeset : 1632596_at
Accessions : protein= NP_649541;, nucleotide= NM_141284;
Pathway : 0005762 // mitochondrial large ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribos
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0037330.
BDGP gene expression has embryonic in situ data for mRpL44: 4 pix of staining in 1 body parts.
BioGrid reports that CG2109 interacts with CG30011 CG31036 CG5446 .
VDRC has 2 RNAi stocks for FBgn0037330 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	225 ± 5	4 of 4	0.80	None
Head	156 ± 8	4 of 4	0.60	Down
Eye	110 ± 3	4 of 4	0.41	Down
Thoracicoabdominal ganglion	283 ± 15	4 of 4	1.00	None
Salivary gland	133 ± 10	4 of 4	0.50	Down
Crop	148 ± 9	4 of 4	0.60	Down
Midgut	164 ± 8	4 of 4	0.60	Down
Tubule	101 ± 5	4 of 4	0.40	Down
Hindgut	181 ± 7	4 of 4	0.70	Down
Heart	132 ± 2	4 of 4	0.49	Down
Fat body	172 ± 15	4 of 4	0.64	Down
Ovary	396 ± 7	4 of 4	1.50	Up
Testis	61 ± 1	4 of 4	0.20	Down
Male accessory glands	165 ± 9	4 of 4	0.60	Down
Virgin spermatheca	91 ± 3	4 of 4	0.34	Down
Mated spermatheca	114 ± 4	4 of 4	0.42	Down
Adult carcass	176 ± 5	4 of 4	0.70	Down
Larval CNS	402 ± 13	4 of 4	1.49	Up
Larval Salivary gland	249 ± 10	4 of 4	0.92	None
Larval midgut	144 ± 5	4 of 4	0.53	Down
Larval tubule	92 ± 2	4 of 4	0.30	Down
Larval hindgut	234 ± 13	4 of 4	0.87	None
Larval fat body	95 ± 7	4 of 4	0.40	Down
Larval trachea	184 ± 21	4 of 4	0.68	Down
Larval carcass	217 ± 26	4 of 4	0.80	None
S2 cells (growing)	245 ± 8	4 of 4	0.91	None
Whole fly	270 ± 20	4 of 4

Looking for CG2109-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720