FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2139-RD through 18771 annotations produced 1 hits

aralar1 (aralar1):

Annotation Number : CG2139
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028646
Gbrowse : chr3R:26271784-26276128 (-) // 100.0 //
Probeset : 1641111_s_at
Accessions : protein= NP_651795; /// NP_733364; /// NP_733365; /// NP_733366;, nucleotide= NM_143538; /// NM_170485; /// NM_170486; /// NM_170487;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from s
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence o
FlyMine data for FBgn0028646.
BDGP gene expression has embryonic in situ data for aralar1: 9 pix of staining in 3 body parts.
Homophila reports that CG2139 is a close match (2e-11) to human gene PHC;SLC25A3 (NP_998776), a gene associated with Micochondrial phosphate carrier deficiency, 610773 (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	107 ± 6	4 of 4	0.60	Down
Head	228 ± 23	4 of 4	1.40	None
Eye	89 ± 9	4 of 4	0.54	Down
Thoracicoabdominal ganglion	116 ± 5	4 of 4	0.70	Down
Salivary gland	186 ± 8	4 of 4	1.13	None
Crop	121 ± 9	4 of 4	0.70	Down
Midgut	119 ± 2	4 of 4	0.70	Down
Tubule	266 ± 9	4 of 4	1.60	Up
Hindgut	210 ± 0	4 of 4	1.30	Up
Heart	305 ± 12	4 of 4	1.85	Up
Fat body	807 ± 266	4 of 4	4.89	Up
Ovary	116 ± 6	4 of 4	0.70	Down
Testis	13 ± 2	2 of 4	0.10	Down
Male accessory glands	76 ± 1	4 of 4	0.50	Down
Virgin spermatheca	526 ± 13	4 of 4	3.18	Up
Mated spermatheca	436 ± 20	4 of 4	2.64	Up
Adult carcass	485 ± 17	4 of 4	2.90	Up
Larval CNS	52 ± 5	4 of 4	0.32	Down
Larval Salivary gland	136 ± 9	4 of 4	0.83	None
Larval midgut	134 ± 11	4 of 4	0.82	None
Larval tubule	103 ± 1	4 of 4	0.60	Down
Larval hindgut	71 ± 4	4 of 4	0.43	Down
Larval fat body	514 ± 43	4 of 4	3.10	Up
Larval trachea	37 ± 5	4 of 4	0.23	Down
Larval carcass	191 ± 11	4 of 4	1.16	None
S2 cells (growing)	104 ± 2	4 of 4	0.63	Down
Whole fly	165 ± 10	4 of 4

Looking for CG2139-RD. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720