FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2158-RA through 18771 annotations produced 1 hits

Nucleoporin 50 (Nup50):

Annotation Number : CG2158
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033264
Gbrowse : chr2R:4010520-4012563 (+) // 100.0 //
Probeset : 1630141_at
Accessions : protein= NP_610355;, nucleotide= NM_136511;
Pathway : engulfment // inferred from mutant phenotype /// 0046907 // intracellular transport // inferred from electronic annotat
Interpro : 0005643 // nuclear pore // inferred from sequence or structural similarity
FlyMine data for FBgn0033264.
BDGP gene expression has embryonic in situ data for CG2158: 39 pix of staining in 7 body parts.
BioGrid reports that CG2158 interacts with CG32183 CG4799 CG3114 CG32354 CG3647 CG9071 .
TRiP has 1 RNAi stocks for FBgn0033264 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033264 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	87 ± 2	4 of 4	0.40	Down
Head	69 ± 3	4 of 4	0.30	Down
Eye	55 ± 4	4 of 4	0.23	Down
Thoracicoabdominal ganglion	87 ± 2	4 of 4	0.40	Down
Salivary gland	108 ± 3	4 of 4	0.44	Down
Crop	83 ± 4	4 of 4	0.30	Down
Midgut	99 ± 4	4 of 4	0.40	Down
Tubule	121 ± 9	4 of 4	0.50	Down
Hindgut	84 ± 3	4 of 4	0.30	Down
Heart	90 ± 4	4 of 4	0.37	Down
Fat body	128 ± 9	4 of 4	0.53	Down
Ovary	502 ± 8	4 of 4	2.10	Up
Testis	122 ± 5	4 of 4	0.50	Down
Male accessory glands	225 ± 9	4 of 4	0.90	None
Virgin spermatheca	132 ± 8	4 of 4	0.54	Down
Mated spermatheca	154 ± 8	4 of 4	0.63	Down
Adult carcass	80 ± 6	4 of 4	0.30	Down
Larval CNS	374 ± 20	4 of 4	1.53	Up
Larval Salivary gland	363 ± 10	4 of 4	1.49	Up
Larval midgut	122 ± 9	4 of 4	0.50	Down
Larval tubule	121 ± 6	4 of 4	0.50	Down
Larval hindgut	183 ± 7	4 of 4	0.75	Down
Larval fat body	85 ± 6	4 of 4	0.40	Down
Larval trachea	245 ± 24	4 of 4	1.00	None
Larval carcass	230 ± 17	4 of 4	0.94	None
S2 cells (growing)	288 ± 9	4 of 4	1.18	None
Whole fly	244 ± 17	4 of 4

Looking for CG2158-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720