FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2163-RB through 18771 annotations produced 2 hits

polyA-binding protein II (Pabp2):

Annotation Number : CG2163
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005648
Gbrowse : chr2R:4018917-4020985 (+) // 100.0 //
Probeset : 1629694_at
Accessions : protein= NP_476902; /// NP_724648;, nucleotide= NM_057554; /// NM_165589;
Pathway : via spliceosome // inferred by curator /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006378 //
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
FlyMine data for FBgn0005648.
BDGP gene expression has embryonic in situ data for Pabp2: 8 pix of staining in 1 body parts.
Homophila reports that CG2163 is a close match (2e-47) to human gene PAB2;PABP2;PABPN1 (NP_004634), a gene associated with Oculopharyngeal muscular dystrophy, 164300 (3).
BioGrid reports that CG2163 interacts with CG2163 CG7010 CG8065 .
TRiP has 1 RNAi stocks for FBgn0005648 available for purchase.
VDRC has 2 RNAi stocks for FBgn0005648 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	53 ± 1	4 of 4	3.70	Up
Head	16 ± 1	4 of 4	1.10	None
Eye	14 ± 1	4 of 4	1.02	None
Thoracicoabdominal ganglion	32 ± 2	4 of 4	2.30	Up
Salivary gland	39 ± 5	4 of 4	2.80	Up
Crop	36 ± 1	4 of 4	2.50	Up
Midgut	14 ± 1	4 of 4	1.00	None
Tubule	15 ± 0	4 of 4	1.10	Up
Hindgut	25 ± 2	4 of 4	1.80	Up
Heart	13 ± 2	3 of 4	0.98	None
Fat body	26 ± 5	4 of 4	1.89	Up
Ovary	24 ± 1	4 of 4	1.70	Up
Testis	13 ± 1	4 of 4	0.90	None
Male accessory glands	74 ± 1	4 of 4	5.20	Up
Virgin spermatheca	43 ± 3	4 of 4	3.08	Up
Mated spermatheca	31 ± 3	4 of 4	2.22	Up
Adult carcass	15 ± 1	3 of 4	1.10	None
Larval CNS	116 ± 21	4 of 4	8.14	Up
Larval Salivary gland	61 ± 1	4 of 4	4.27	Up
Larval midgut	16 ± 2	4 of 4	1.14	None
Larval tubule	21 ± 2	4 of 4	1.50	Up
Larval hindgut	25 ± 2	4 of 4	1.79	Up
Larval fat body	30 ± 3	4 of 4	2.10	Up
Larval trachea	26 ± 3	4 of 4	1.88	Up
Larval carcass	19 ± 2	4 of 4	1.37	None
S2 cells (growing)	44 ± 2	4 of 4	3.13	Up
Whole fly	14 ± 0	4 of 4

polyA-binding protein II (Pabp2):

Annotation Number : CG2163
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005648
Gbrowse : chr2R:4018917-4020985 (+) // 100.0 //
Probeset : 1631244_a_at
Accessions : protein= NP_476902; /// NP_724648;, nucleotide= NM_057554; /// NM_165589;
Pathway : via spliceosome // inferred by curator /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006378 //
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
FlyMine data for FBgn0005648.
BDGP gene expression has embryonic in situ data for Pabp2: 8 pix of staining in 1 body parts.
Homophila reports that CG2163 is a close match (2e-47) to human gene PAB2;PABP2;PABPN1 (NP_004634), a gene associated with Oculopharyngeal muscular dystrophy, 164300 (3).
BioGrid reports that CG2163 interacts with CG2163 CG7010 CG8065 .
TRiP has 1 RNAi stocks for FBgn0005648 available for purchase.
VDRC has 2 RNAi stocks for FBgn0005648 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	98 ± 3	4 of 4	0.50	Down
Head	101 ± 9	4 of 4	0.50	Down
Eye	140 ± 6	4 of 4	0.73	Down
Thoracicoabdominal ganglion	110 ± 5	4 of 4	0.60	Down
Salivary gland	176 ± 14	4 of 4	0.92	None
Crop	189 ± 5	4 of 4	1.00	None
Midgut	160 ± 10	4 of 4	0.80	Down
Tubule	111 ± 10	4 of 4	0.60	Down
Hindgut	161 ± 4	4 of 4	0.80	Down
Heart	158 ± 8	4 of 4	0.82	Down
Fat body	144 ± 12	4 of 4	0.75	Down
Ovary	301 ± 11	4 of 4	1.60	Up
Testis	205 ± 6	4 of 4	1.10	None
Male accessory glands	227 ± 20	4 of 4	1.20	None
Virgin spermatheca	57 ± 1	4 of 4	0.30	Down
Mated spermatheca	77 ± 3	4 of 4	0.40	Down
Adult carcass	106 ± 5	4 of 4	0.60	Down
Larval CNS	711 ± 22	4 of 4	3.69	Up
Larval Salivary gland	498 ± 58	4 of 4	2.59	Up
Larval midgut	179 ± 2	4 of 4	0.93	None
Larval tubule	268 ± 8	4 of 4	1.40	Up
Larval hindgut	250 ± 10	4 of 4	1.30	Up
Larval fat body	183 ± 18	4 of 4	0.90	None
Larval trachea	412 ± 74	4 of 4	2.14	Up
Larval carcass	279 ± 8	4 of 4	1.45	Up
S2 cells (growing)	460 ± 16	4 of 4	2.39	Up
Whole fly	192 ± 7	4 of 4

Looking for CG2163-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720