FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2168-RA through 18771 annotations produced 1 hits

ribosomal protein S3a (RpS3A):

Annotation Number : CG2168
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0017545
Gbrowse : chr4:86744-87863 (-) // 100.0 //
Probeset : 1638439_a_at
Accessions : protein= NP_524618; /// NP_726518; /// NP_726519;, nucleotide= NM_079879; /// NM_166714; /// NM_166715;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic ann
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0017545.
BDGP gene expression has embryonic in situ data for RpS3A: 4 pix of staining in 1 body parts.
BioGrid reports that CG2168 interacts with CG31457 CG6840 CG2224 CG3004 CG3099 CG3335 CG3948 CG4792 CG4818 CG4865 CG5053 CG5494 CG6156 CG6544 CG6843 CG7231 CG7347 CG7809 CG9331 CG9511 CG32581 CG8974 .
VDRC has 4 RNAi stocks for FBgn0017545 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3475 ± 76	4 of 4	0.70	Down
Head	5215 ± 201	4 of 4	1.00	None
Eye	8606 ± 217	4 of 4	1.67	Up
Thoracicoabdominal ganglion	4947 ± 93	4 of 4	1.00	None
Salivary gland	14913 ± 398	4 of 4	2.89	Up
Crop	7390 ± 467	4 of 4	1.40	Up
Midgut	6065 ± 135	4 of 4	1.20	None
Tubule	7264 ± 98	4 of 4	1.40	Up
Hindgut	5834 ± 155	4 of 4	1.10	None
Heart	8450 ± 624	4 of 4	1.64	Up
Fat body	6351 ± 775	4 of 4	1.23	None
Ovary	4338 ± 175	4 of 4	0.80	None
Testis	1713 ± 17	4 of 4	0.30	Down
Male accessory glands	11197 ± 342	4 of 4	2.20	Up
Virgin spermatheca	6446 ± 253	4 of 4	1.25	Up
Mated spermatheca	6648 ± 228	4 of 4	1.29	Up
Adult carcass	6695 ± 422	4 of 4	1.30	Up
Larval CNS	3080 ± 243	4 of 4	0.60	Down
Larval Salivary gland	9397 ± 487	4 of 4	1.82	Up
Larval midgut	5226 ± 262	4 of 4	1.01	None
Larval tubule	6411 ± 112	4 of 4	1.20	Up
Larval hindgut	5141 ± 61	4 of 4	1.00	None
Larval fat body	8869 ± 882	4 of 4	1.70	Up
Larval trachea	7494 ± 424	4 of 4	1.45	Up
Larval carcass	5633 ± 481	4 of 4	1.09	None
S2 cells (growing)	4784 ± 98	4 of 4	0.93	None
Whole fly	5154 ± 387	4 of 4

Looking for CG2168-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720