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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG2185-RA through 18771 annotations produced 1 hits



ethanol sensitive with low memory (elm):

Annotation Number : CG2185
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037358
Gbrowse : chr3R:1478554-1480613 (-) // 100.0 //
Probeset : 1632462_at
Accessions : protein= NP_649568;, nucleotide= NM_141311;
Interpro : 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding //
FlyMine data for FBgn0037358.
TRiP has 1 RNAi stocks for FBgn0037358 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037358 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain575 ± 224 of 4 1.40Up
Head473 ± 164 of 4 1.20Up
Eye522 ± 184 of 4 1.31Up
Thoracicoabdominal ganglion538 ± 84 of 4 1.30Up
Salivary gland1676 ± 714 of 4 4.19Up
Crop691 ± 134 of 4 1.70Up
Midgut995 ± 304 of 4 2.50Up
Tubule419 ± 64 of 4 1.00Up
Hindgut916 ± 134 of 4 2.30Up
Heart834 ± 274 of 4 2.09Up
Fat body538 ± 364 of 4 1.35Up
Ovary353 ± 64 of 4 0.90Down
Testis234 ± 114 of 4 0.60Down
Male accessory glands385 ± 324 of 4 1.00None
Virgin spermatheca238 ± 194 of 4 0.60Down
Mated spermatheca343 ± 184 of 4 0.86None
Adult carcass419 ± 124 of 4 1.00None
Larval CNS312 ± 334 of 4 0.78Down
Larval Salivary gland317 ± 204 of 4 0.79Down
Larval midgut878 ± 324 of 4 2.20Up
Larval tubule439 ± 114 of 4 1.10None
Larval hindgut2277 ± 394 of 4 5.69Up
Larval fat body106 ± 44 of 4 0.30Down
Larval trachea380 ± 244 of 4 0.95None
Larval carcass168 ± 104 of 4 0.42Down
S2 cells (growing)394 ± 104 of 4 0.99None
Whole fly400 ± 144 of 4

Looking for CG2185-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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