FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2198-RB through 18771 annotations produced 1 hits

amalgam (Ama):

Annotation Number : CG2198
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000071
Gbrowse : chr3R:2588314-2590983 (+) // 100.0 //
Probeset : 1623950_s_at
Accessions : protein= NP_476579; /// NP_731114; /// NP_788589;, nucleotide= NM_057231; /// NM_169160; /// NM_176412;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or str
Interpro : 0003823 // antigen binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical in
FlyMine data for FBgn0000071.
BDGP gene expression has embryonic in situ data for Ama: 80 pix of staining in 27 body parts.
Homophila reports that CG2198 is a close match (9e-12) to human gene CAML1;HSAS1;L1CAM (NP_076493), a gene associated with Corpus callosum, partial agenesis of, 304100 (3);CRASH syndrome, 303350 (3);Hydrocephalus due to aqueductal stenosis, 307000 (3);Hydrocephalus with congenital idiopathic intestinal pseudoobstruction, 307000 (3);Hydrocephalus with Hirschsprung disease and cleft palate, 142623 (3);MASA syndrome, 303350 (3).
BioGrid reports that CG2198 interacts with CG30106 CG4057 CG5471 CG7109 CG8292 .
TRiP has 1 RNAi stocks for FBgn0000071 available for purchase.
VDRC has 2 RNAi stocks for FBgn0000071 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 2	1 of 4	0.30	None
Head	6 ± 1	0 of 4	0.10	Down
Eye	4 ± 1	0 of 4	0.09	Down
Thoracicoabdominal ganglion	55 ± 4	4 of 4	1.10	None
Salivary gland	13 ± 3	0 of 4	0.28	None
Crop	18 ± 5	1 of 4	0.40	None
Midgut	5 ± 1	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	5 ± 0	0 of 4	0.10	Down
Heart	5 ± 1	0 of 4	0.11	Down
Fat body	5 ± 1	0 of 4	0.12	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	8 ± 1	0 of 4	0.20	Down
Male accessory glands	6 ± 2	0 of 4	0.10	Down
Virgin spermatheca	5 ± 0	0 of 4	0.10	Down
Mated spermatheca	6 ± 2	0 of 4	0.14	Down
Adult carcass	7 ± 2	0 of 4	0.20	Down
Larval CNS	1239 ± 90	4 of 4	25.34	Up
Larval Salivary gland	13 ± 2	0 of 4	0.27	None
Larval midgut	170 ± 25	4 of 4	3.49	Up
Larval tubule	41 ± 6	4 of 4	0.80	None
Larval hindgut	63 ± 8	4 of 4	1.29	None
Larval fat body	4432 ± 551	4 of 4	90.60	Up
Larval trachea	104 ± 30	4 of 4	2.14	Up
Larval carcass	253 ± 42	4 of 4	5.19	Up
S2 cells (growing)	637 ± 20	4 of 4	13.03	Up
Whole fly	48 ± 12	4 of 4

Looking for CG2198-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720