FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2246-RA through 18771 annotations produced 1 hits

(CG2246):

Annotation Number : CG2246
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039790
Gbrowse : chr3R:26418733-26427211 (-) // 100.0 //
Probeset : 1629239_s_at
Accessions : protein= NP_001163778; /// NP_651813; /// NP_733386; /// NP_733387; /// NP_733388; /// NP_733389; /// NP_733390;, nucleotide= NM_001170307; /// NM_143556; /// NM_170507; /// NM_170508; /// NM_170509; /// NM_170510; /// NM_170511;
Interpro : 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase
FlyMine data for FBgn0039790.
BDGP gene expression has embryonic in situ data for CG2246: 11 pix of staining in 7 body parts.
Homophila reports that CG2246 is a close match (1e-49) to human gene CMTX5;PRPS1 (NP_002755), a gene associated with Arts syndrome, 301835 (3);Charcot-Marie-Tooth disease, X-linked recessive, 5, 311070 (3);Gout, PRPS-related, 300661 (3);Phosphoribosylpyrophosphate synthetase superactivity, 300661 (3).
BioGrid reports that CG2246 interacts with CG6767 CG7298 CG2803 CG3922 CG5383 CG6510 CG8400 .
TRiP has 1 RNAi stocks for FBgn0039790 available for purchase.
VDRC has 5 RNAi stocks for FBgn0039790 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	555 ± 9	4 of 4	1.90	Up
Head	505 ± 23	4 of 4	1.80	Up
Eye	1162 ± 28	4 of 4	4.04	Up
Thoracicoabdominal ganglion	537 ± 7	4 of 4	1.90	Up
Salivary gland	524 ± 8	4 of 4	1.82	Up
Crop	353 ± 11	4 of 4	1.20	Up
Midgut	326 ± 7	4 of 4	1.10	Up
Tubule	775 ± 27	4 of 4	2.70	Up
Hindgut	450 ± 16	4 of 4	1.60	Up
Heart	204 ± 5	4 of 4	0.71	Down
Fat body	189 ± 9	4 of 4	0.66	Down
Ovary	484 ± 12	4 of 4	1.70	Up
Testis	76 ± 1	4 of 4	0.30	Down
Male accessory glands	311 ± 13	4 of 4	1.10	None
Virgin spermatheca	280 ± 2	4 of 4	0.97	None
Mated spermatheca	294 ± 6	4 of 4	1.02	None
Adult carcass	211 ± 11	4 of 4	0.70	Down
Larval CNS	471 ± 14	4 of 4	1.64	Up
Larval Salivary gland	315 ± 17	4 of 4	1.10	None
Larval midgut	380 ± 4	4 of 4	1.32	Up
Larval tubule	648 ± 23	4 of 4	2.30	Up
Larval hindgut	463 ± 12	4 of 4	1.61	Up
Larval fat body	408 ± 31	4 of 4	1.40	Up
Larval trachea	584 ± 84	4 of 4	2.03	Up
Larval carcass	284 ± 14	4 of 4	0.99	None
S2 cells (growing)	335 ± 10	4 of 4	1.16	Up
Whole fly	288 ± 11	4 of 4

Looking for CG2246-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720