FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2328-RA through 18771 annotations produced 1 hits

chr2R:5865095-5868284 (+) // 100.0 // (even-skipped):

Annotation Number : CG2328
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1622897_at
Accessions : protein= , nucleotide= NP_523670;
Pathway : "0001709 // cell fate determination // non-traceable author statement /// 0006350 // transcription // inferred from elec
Interpro : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
FlyMine data for full length.
Homophila reports that CG2328 is a close match (3e-12) to human gene HOXA2 (NP_006726), a gene associated with Microtia, hearing impairment, and cleft palate, 612290 (3).
BioGrid reports that CG2328 interacts with CG6964 CG4846 CG2047 CG8384 CG7981 CG7981 CG1322 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 0	0 of 4	1.10	None
Head	7 ± 2	0 of 4	1.00	None
Eye	3 ± 1	0 of 4	0.41	Down
Thoracicoabdominal ganglion	14 ± 2	1 of 4	1.90	None
Salivary gland	9 ± 5	0 of 4	1.29	None
Crop	9 ± 0	0 of 4	1.30	None
Midgut	7 ± 3	0 of 4	1.00	None
Tubule	6 ± 1	0 of 4	0.90	None
Hindgut	9 ± 2	0 of 4	1.20	None
Heart	4 ± 1	0 of 4	0.58	None
Fat body	20 ± 8	1 of 4	2.72	Up
Ovary	5 ± 1	0 of 4	0.70	None
Testis	6 ± 2	0 of 4	0.90	None
Male accessory glands	7 ± 3	0 of 4	1.00	None
Virgin spermatheca	7 ± 1	0 of 4	0.96	None
Mated spermatheca	7 ± 2	0 of 4	1.04	None
Adult carcass	10 ± 2	0 of 4	1.40	None
Larval CNS	19 ± 4	4 of 4	2.60	Up
Larval Salivary gland	10 ± 2	1 of 4	1.36	None
Larval midgut	10 ± 1	0 of 4	1.37	None
Larval tubule	9 ± 0	0 of 4	1.20	None
Larval hindgut	12 ± 2	1 of 4	1.59	None
Larval fat body	18 ± 2	3 of 4	2.40	Up
Larval trachea	6 ± 3	1 of 4	0.92	None
Larval carcass	18 ± 1	0 of 4	2.45	Up
S2 cells (growing)	6 ± 1	0 of 4	0.88	None
Whole fly	7 ± 0	0 of 4

Looking for CG2328-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720