FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2330-RA through 18771 annotations produced 1 hits

CG2330 (Neurochondrin):

Annotation Number : CG2330
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037447
Gbrowse : chr3R:2294133-2296739 (+) // 100.0 //
Probeset : 1629837_at
Accessions : protein= NP_649658;, nucleotide= NM_141401;
Pathway : 0030425 // dendrite // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred fro
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0037447.
BDGP gene expression has embryonic in situ data for CG2330: 13 pix of staining in 3 body parts.
BioGrid reports that CG2330 interacts with CG9520 .
TRiP has 1 RNAi stocks for FBgn0037447 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037447 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	0 of 4	0.10	Down
Head	136 ± 11	4 of 4	1.00	None
Eye	34 ± 5	4 of 4	0.24	Down
Thoracicoabdominal ganglion	17 ± 1	1 of 4	0.10	Down
Salivary gland	35 ± 4	0 of 4	0.25	Down
Crop	1535 ± 22	4 of 4	10.70	Up
Midgut	138 ± 4	4 of 4	1.00	None
Tubule	23 ± 1	1 of 4	0.20	Down
Hindgut	632 ± 9	4 of 4	4.40	Up
Heart	724 ± 60	4 of 4	5.06	Up
Fat body	48 ± 6	3 of 4	0.34	Down
Ovary	20 ± 2	3 of 4	0.10	Down
Testis	79 ± 0	4 of 4	0.60	Down
Male accessory glands	149 ± 5	4 of 4	1.00	None
Virgin spermatheca	45 ± 2	4 of 4	0.32	Down
Mated spermatheca	64 ± 10	4 of 4	0.45	Down
Adult carcass	354 ± 10	4 of 4	2.50	Up
Larval CNS	15 ± 3	4 of 4	0.11	Down
Larval Salivary gland	8 ± 2	0 of 4	0.06	Down
Larval midgut	270 ± 23	4 of 4	1.89	Up
Larval tubule	33 ± 2	2 of 4	0.20	Down
Larval hindgut	584 ± 18	4 of 4	4.08	Up
Larval fat body	11 ± 1	0 of 4	0.10	Down
Larval trachea	81 ± 23	4 of 4	0.57	Down
Larval carcass	1752 ± 39	4 of 4	12.22	Up
S2 cells (growing)	6 ± 0	0 of 4	0.04	Down
Whole fly	143 ± 17	4 of 4

Looking for CG2330-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720