FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2397-RA through 18771 annotations produced 1 hits

Cyp6a13 (Cyp6a13):

Annotation Number : CG2397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033304
Gbrowse : chr2R:4458006-4459650 (+) // 100.0 //
Probeset : 1635110_at
Accessions : protein= NP_610390;, nucleotide= NM_136546;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0033304.
BDGP gene expression has embryonic in situ data for Cyp6a13: 9 pix of staining in 3 body parts.
Homophila reports that CG2397 is a close match (1e-11) to human gene CYP1B1;GLC3A (NP_000095), a gene associated with Glaucoma 3A, primary congenital, 231300 (3);Glaucoma, early-onset, digenic (3);Glaucoma, primary open angle, adult-onset, 137760 (3);Glaucoma, primary open angle, juvenile-onset, 137750 (3);Peters anomaly, 604229 (3).
BioGrid reports that CG2397 interacts with CG5558 .
VDRC has 3 RNAi stocks for FBgn0033304 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	192 ± 5	4 of 4	2.10	Up
Head	248 ± 15	4 of 4	2.60	Up
Eye	145 ± 3	4 of 4	1.55	Up
Thoracicoabdominal ganglion	323 ± 28	4 of 4	3.40	Up
Salivary gland	275 ± 51	4 of 4	2.94	Up
Crop	147 ± 7	4 of 4	1.60	Up
Midgut	303 ± 4	4 of 4	3.20	Up
Tubule	406 ± 31	4 of 4	4.30	Up
Hindgut	227 ± 3	4 of 4	2.40	Up
Heart	396 ± 17	4 of 4	4.22	Up
Fat body	218 ± 22	4 of 4	2.32	Up
Ovary	34 ± 2	4 of 4	0.40	Down
Testis	28 ± 1	4 of 4	0.30	Down
Male accessory glands	365 ± 6	4 of 4	3.90	Up
Virgin spermatheca	239 ± 11	4 of 4	2.55	Up
Mated spermatheca	246 ± 12	4 of 4	2.63	Up
Adult carcass	229 ± 7	4 of 4	2.40	Up
Larval CNS	29 ± 7	4 of 4	0.32	Down
Larval Salivary gland	110 ± 16	4 of 4	1.18	None
Larval midgut	850 ± 93	4 of 4	9.06	Up
Larval tubule	1018 ± 37	4 of 4	10.80	Up
Larval hindgut	552 ± 69	4 of 4	5.88	Up
Larval fat body	213 ± 64	4 of 4	2.30	None
Larval trachea	290 ± 27	4 of 4	3.10	Up
Larval carcass	140 ± 24	4 of 4	1.49	None
S2 cells (growing)	13 ± 0	4 of 4	0.14	Down
Whole fly	93 ± 3	4 of 4

Looking for CG2397-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720