Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG2614-RA through 18771 annotations produced 1 hits



(CG2614):

Annotation Number : CG2614
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032873
Gbrowse : chr2L:20656427-20659220 (+) // 100.0 //
Probeset : 1628241_at
Accessions : protein= NP_610045;, nucleotide= NM_136201;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferr
FlyMine data for FBgn0032873.
VDRC has 2 RNAi stocks for FBgn0032873 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain68 14 of 4 0.50Down
Head67 24 of 4 0.50Down
Eye54 14 of 4 0.40Down
Thoracicoabdominal ganglion78 34 of 4 0.60Down
Salivary gland100 54 of 4 0.74Down
Crop104 24 of 4 0.80Down
Midgut59 34 of 4 0.40Down
Tubule88 84 of 4 0.70Down
Hindgut82 54 of 4 0.60Down
Heart70 34 of 4 0.52Down
Fat body75 94 of 4 0.56Down
Ovary364 74 of 4 2.70Up
Testis39 24 of 4 0.30Down
Male accessory glands131 64 of 4 1.00None
Virgin spermatheca121 64 of 4 0.90None
Mated spermatheca140 94 of 4 1.04None
Adult carcass68 34 of 4 0.50Down
Larval CNS150 64 of 4 1.11None
Larval Salivary gland119 124 of 4 0.88None
Larval midgut60 14 of 4 0.45Down
Larval tubule83 44 of 4 0.60Down
Larval hindgut106 34 of 4 0.79Down
Larval fat body75 34 of 4 0.60Down
Larval trachea128 274 of 4 0.95None
Larval carcass80 94 of 4 0.59Down
S2 cells (growing)167 74 of 4 1.24Up
Whole fly135 54 of 4

Looking for CG2614-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime