FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2666-RA through 18771 annotations produced 1 hits

Chitin Synthase B (kkv):

Annotation Number : CG2666
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001311
Gbrowse : chr3R:1203815-1218587 (-) // 100.0 //
Probeset : 1639130_a_at
Accessions : protein= NP_524233; /// NP_730928; /// NP_996152;, nucleotide= NM_079509; /// NM_169052; /// NM_206430;
Pathway : open tracheal system // inferred from mutant phenotype /// 0035159 // regulation of tube length
Interpro : open tracheal system // inferred from mutant phenotype"
FlyMine data for FBgn0001311.
BDGP gene expression has embryonic in situ data for kkv: 28 pix of staining in 11 body parts.
VDRC has 3 RNAi stocks for FBgn0001311 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	Down
Head	6 ± 1	1 of 4	0.60	None
Eye	21 ± 3	4 of 4	2.02	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.40	None
Salivary gland	11 ± 4	0 of 4	1.06	None
Crop	13 ± 1	2 of 4	1.30	None
Midgut	3 ± 0	0 of 4	0.30	Down
Tubule	3 ± 0	0 of 4	0.30	Down
Hindgut	11 ± 0	2 of 4	1.00	None
Heart	6 ± 2	1 of 4	0.58	None
Fat body	7 ± 2	0 of 4	0.72	None
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	41 ± 1	4 of 4	3.90	Up
Male accessory glands	3 ± 1	0 of 4	0.30	Down
Virgin spermatheca	4 ± 1	0 of 4	0.45	None
Mated spermatheca	3 ± 1	0 of 4	0.36	Down
Adult carcass	10 ± 2	0 of 4	1.00	None
Larval CNS	27 ± 2	4 of 4	2.65	Up
Larval Salivary gland	16 ± 1	3 of 4	1.53	None
Larval midgut	17 ± 2	4 of 4	1.70	None
Larval tubule	5 ± 1	0 of 4	0.60	None
Larval hindgut	229 ± 7	4 of 4	21.89	Up
Larval fat body	6 ± 2	1 of 4	0.60	None
Larval trachea	1283 ± 137	4 of 4	122.51	Up
Larval carcass	1636 ± 120	4 of 4	156.20	Up
S2 cells (growing)	2 ± 0	0 of 4	0.22	Down
Whole fly	10 ± 2	3 of 4

Looking for CG2666-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720