FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2684-RA through 18771 annotations produced 1 hits

factor 2 (lds):

Annotation Number : CG2684
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002542
Gbrowse : chr3R:3746155-3750211 (+) // 100.0 //
Probeset : 1634695_at
Accessions : protein= NP_524850;, nucleotide= NM_080111;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0002542.
Homophila reports that CG2684 is a close match (8e-15) to human gene ATRX;MRXHF1;SFM1;SHS;XH2;XNP (NP_612114), a gene associated with Alpha-thalassemia myelodysplasia syndrome, somatic, 300448 (3);Alpha-thalassemia/mental retardation syndrome, 301040 (3);Mental retardation-hypotonic facies syndrome, X-linked, 309580 (3).
TRiP has 1 RNAi stocks for FBgn0002542 available for purchase.
VDRC has 2 RNAi stocks for FBgn0002542 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 1	2 of 4	0.10	Down
Head	11 ± 1	2 of 4	0.10	Down
Eye	14 ± 1	4 of 4	0.08	Down
Thoracicoabdominal ganglion	12 ± 2	3 of 4	0.10	Down
Salivary gland	25 ± 4	3 of 4	0.14	Down
Crop	9 ± 2	2 of 4	0.10	Down
Midgut	20 ± 1	2 of 4	0.10	Down
Tubule	18 ± 2	3 of 4	0.10	Down
Hindgut	15 ± 1	4 of 4	0.10	Down
Heart	12 ± 1	4 of 4	0.07	Down
Fat body	11 ± 6	1 of 4	0.07	Down
Ovary	415 ± 5	4 of 4	2.40	Up
Testis	176 ± 6	4 of 4	1.00	None
Male accessory glands	6 ± 1	0 of 4	0.00	Down
Virgin spermatheca	20 ± 0	4 of 4	0.12	Down
Mated spermatheca	22 ± 2	4 of 4	0.13	Down
Adult carcass	17 ± 1	0 of 4	0.10	Down
Larval CNS	183 ± 14	4 of 4	1.05	None
Larval Salivary gland	36 ± 3	4 of 4	0.21	Down
Larval midgut	26 ± 1	0 of 4	0.15	Down
Larval tubule	36 ± 2	4 of 4	0.20	Down
Larval hindgut	34 ± 1	4 of 4	0.20	Down
Larval fat body	54 ± 14	4 of 4	0.30	Down
Larval trachea	95 ± 12	4 of 4	0.55	Down
Larval carcass	54 ± 4	4 of 4	0.31	Down
S2 cells (growing)	197 ± 3	4 of 4	1.13	Up
Whole fly	174 ± 5	4 of 4

Looking for CG2684-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720