FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2762-RA through 18771 annotations produced 1 hits

ushaped (ush):

Annotation Number : CG2762
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003963
Gbrowse : chr2L:523466-540537 (+) // 99.92 //
Probeset : 1632698_at
Accessions : protein= NP_476780;, nucleotide= NM_057432;
Pathway : leading edge cell fate determination // non-traceable author statement /// 0007398 // ectoderm development // traceable
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
FlyMine data for FBgn0003963.
BDGP gene expression has embryonic in situ data for ush: 52 pix of staining in 20 body parts.
BioGrid reports that CG2762 interacts with CG12212 CG3978 CG3992 CG3992 CG10619 CG7223 .
TRiP has 2 RNAi stocks for FBgn0003963 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003963 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	46 ± 1	4 of 4	0.90	None
Head	41 ± 2	4 of 4	0.80	None
Eye	23 ± 4	3 of 4	0.47	Down
Thoracicoabdominal ganglion	60 ± 4	4 of 4	1.20	None
Salivary gland	41 ± 4	4 of 4	0.84	None
Crop	15 ± 2	4 of 4	0.30	Down
Midgut	6 ± 2	0 of 4	0.10	Down
Tubule	17 ± 1	3 of 4	0.40	Down
Hindgut	20 ± 1	4 of 4	0.40	Down
Heart	158 ± 13	4 of 4	3.23	Up
Fat body	20 ± 6	4 of 4	0.42	Down
Ovary	100 ± 3	4 of 4	2.00	Up
Testis	21 ± 2	4 of 4	0.40	Down
Male accessory glands	115 ± 3	4 of 4	2.40	Up
Virgin spermatheca	78 ± 2	4 of 4	1.61	Up
Mated spermatheca	96 ± 9	4 of 4	1.98	Up
Adult carcass	32 ± 3	4 of 4	0.70	Down
Larval CNS	105 ± 7	4 of 4	2.16	Up
Larval Salivary gland	13 ± 1	0 of 4	0.28	Down
Larval midgut	78 ± 4	4 of 4	1.60	Up
Larval tubule	20 ± 2	4 of 4	0.40	Down
Larval hindgut	27 ± 0	4 of 4	0.56	Down
Larval fat body	82 ± 9	4 of 4	1.70	Up
Larval trachea	54 ± 6	4 of 4	1.12	None
Larval carcass	72 ± 5	4 of 4	1.48	Up
S2 cells (growing)	662 ± 9	4 of 4	13.54	Up
Whole fly	49 ± 2	4 of 4

Looking for CG2762-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720