Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG2794-RA through 18771 annotations produced 1 hits



(CG2794):

Annotation Number : CG2794
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031265
Gbrowse : chr2L:564169-566479 (+) // 100.0 //
Probeset : 1635874_at
Accessions : protein= NP_608533;, nucleotide= NM_134689;
Interpro : "0016798 // hydrolase activity
FlyMine data for FBgn0031265.
VDRC has 2 RNAi stocks for FBgn0031265 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain20 ± 14 of 4 0.30Down
Head35 ± 34 of 4 0.40Down
Eye32 ± 24 of 4 0.40Down
Thoracicoabdominal ganglion22 ± 14 of 4 0.30Down
Salivary gland54 ± 54 of 4 0.67Down
Crop49 ± 34 of 4 0.60Down
Midgut61 ± 44 of 4 0.80Down
Tubule64 ± 34 of 4 0.80Down
Hindgut36 ± 24 of 4 0.50Down
Heart57 ± 14 of 4 0.71Down
Fat body60 ± 104 of 4 0.75Down
Ovary87 ± 34 of 4 1.10None
Testis370 ± 114 of 4 4.60Up
Male accessory glands94 ± 44 of 4 1.20Up
Virgin spermatheca100 ± 44 of 4 1.23Up
Mated spermatheca106 ± 34 of 4 1.31Up
Adult carcass49 ± 14 of 4 0.60Down
Larval CNS120 ± 84 of 4 1.48Up
Larval Salivary gland149 ± 114 of 4 1.84Up
Larval midgut59 ± 24 of 4 0.74Down
Larval tubule51 ± 34 of 4 0.60Down
Larval hindgut96 ± 54 of 4 1.19None
Larval fat body66 ± 154 of 4 0.80None
Larval trachea135 ± 134 of 4 1.67Up
Larval carcass106 ± 104 of 4 1.31None
S2 cells (growing)162 ± 74 of 4 1.99Up
Whole fly81 ± 24 of 4

Looking for CG2794-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime