FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2822-RA through 18771 annotations produced 1 hits

Shaker cognate w (Shaw):

Annotation Number : CG2822
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003386
Gbrowse : chr2L:3718186-3725678 (+) // 100.0 //
Probeset : 1623070_a_at
Accessions : protein= NP_001137782; /// NP_476721; /// NP_722937;, nucleotide= NM_001144310; /// NM_057373; /// NM_164554;
Pathway : 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0008076 // voltage-gated potassium cha
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity
FlyMine data for FBgn0003386.
BDGP gene expression has embryonic in situ data for Shaw: 4 pix of staining in 1 body parts.
Homophila reports that CG2822 is a close match (2e-12) to human gene BFNC2;EBN2;KCNQ3 (NP_004510), a gene associated with Epilepsy, benign neonatal, type 2, 121201 (3).
TRiP has 1 RNAi stocks for FBgn0003386 available for purchase.
VDRC has 1 RNAi stocks for FBgn0003386 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	164 ± 7	4 of 4	9.10	Up
Head	39 ± 5	4 of 4	2.20	Up
Eye	23 ± 4	4 of 4	1.28	None
Thoracicoabdominal ganglion	79 ± 9	4 of 4	4.40	Up
Salivary gland	12 ± 2	0 of 4	0.70	None
Crop	47 ± 3	4 of 4	2.60	Up
Midgut	37 ± 4	2 of 4	2.10	Up
Tubule	12 ± 0	1 of 4	0.70	Down
Hindgut	20 ± 0	2 of 4	1.10	None
Heart	2 ± 0	0 of 4	0.15	Down
Fat body	13 ± 6	0 of 4	0.72	None
Ovary	9 ± 1	1 of 4	0.50	Down
Testis	13 ± 0	0 of 4	0.70	None
Male accessory glands	20 ± 1	0 of 4	1.10	None
Virgin spermatheca	11 ± 2	0 of 4	0.63	None
Mated spermatheca	7 ± 1	0 of 4	0.40	Down
Adult carcass	18 ± 3	0 of 4	1.00	None
Larval CNS	33 ± 5	4 of 4	1.87	Up
Larval Salivary gland	20 ± 2	0 of 4	1.10	None
Larval midgut	47 ± 2	0 of 4	2.63	Up
Larval tubule	13 ± 0	1 of 4	0.70	None
Larval hindgut	19 ± 0	0 of 4	1.08	None
Larval fat body	21 ± 4	3 of 4	1.20	None
Larval trachea	6 ± 2	0 of 4	0.34	Down
Larval carcass	10 ± 1	0 of 4	0.56	Down
S2 cells (growing)	12 ± 1	0 of 4	0.71	None
Whole fly	18 ± 1	3 of 4

Looking for CG2822-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720