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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG2835-RC through 18771 annotations produced 1 hits



G protein salpha 60A (G-salpha60A):

Annotation Number : CG2835
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001123
Gbrowse : chr2R:19830063-19834458 (+) // 100.0 //
Probeset : 1639015_s_at
Accessions : protein= NP_001163283; /// NP_477505; /// NP_477506; /// NP_726388;, nucleotide= NM_001169812; /// NM_058157; /// NM_058158; /// NM_166640;
Pathway : 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrim
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0001123.
BDGP gene expression has embryonic in situ data for G-salpha60A: 17 pix of staining in 14 body parts.
Homophila reports that CG2835 is a close match (3e-66) to human gene GIP;GNAI2;GNAI2B (NP_002061), a gene associated with Pituitary ACTH-secreting adenoma (3);Ventricular tachycardia, idiopathic, 192605 (3).
BioGrid reports that CG2835 interacts with CG6846 CG8186 .
TRiP has 1 RNAi stocks for FBgn0001123 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001123 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1451 ± 244 of 4 4.70Up
Head707 ± 474 of 4 2.30Up
Eye737 ± 114 of 4 2.40Up
Thoracicoabdominal ganglion1314 ± 284 of 4 4.30Up
Salivary gland846 ± 664 of 4 2.75Up
Crop1222 ± 284 of 4 4.00Up
Midgut589 ± 84 of 4 1.90Up
Tubule727 ± 264 of 4 2.40Up
Hindgut897 ± 144 of 4 2.90Up
Heart660 ± 334 of 4 2.15Up
Fat body399 ± 34 of 4 1.30Up
Ovary78 ± 54 of 4 0.30Down
Testis84 ± 44 of 4 0.30Down
Male accessory glands1270 ± 424 of 4 4.10Up
Virgin spermatheca448 ± 184 of 4 1.46Up
Mated spermatheca463 ± 234 of 4 1.51Up
Adult carcass433 ± 224 of 4 1.40Up
Larval CNS1055 ± 954 of 4 3.43Up
Larval Salivary gland843 ± 154 of 4 2.74Up
Larval midgut562 ± 94 of 4 1.83Up
Larval tubule815 ± 214 of 4 2.70Up
Larval hindgut1016 ± 184 of 4 3.30Up
Larval fat body580 ± 454 of 4 1.90Up
Larval trachea1488 ± 694 of 4 4.84Up
Larval carcass1332 ± 594 of 4 4.34Up
S2 cells (growing)767 ± 74 of 4 2.50Up
Whole fly307 ± 164 of 4

Looking for CG2835-RC. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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