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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG2864-RA through 18771 annotations produced 1 hits



poly(ADP-ribose) glycohydrolase (Parg):

Annotation Number : CG2864
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023216
Gbrowse : chrX:3562753-3565602 (-) // 100.0 //
Probeset : 1640791_at
Accessions : protein= NP_477321;, nucleotide= NM_057973;
Pathway : engulfment // inferred from mutant phenotype /// 0009408 // response to heat // inferred from mutant phenotype /// 0035
Interpro : 0005654 // nucleoplasm // inferred from direct assay
FlyMine data for FBgn0023216.
BioGrid reports that CG2864 interacts with CG5027 .
TRiP has 1 RNAi stocks for FBgn0023216 available for purchase.
VDRC has 2 RNAi stocks for FBgn0023216 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain49 24 of 4 1.10None
Head26 13 of 4 0.60Down
Eye17 24 of 4 0.40Down
Thoracicoabdominal ganglion42 44 of 4 0.90None
Salivary gland42 42 of 4 0.93None
Crop33 24 of 4 0.70Down
Midgut31 34 of 4 0.70Down
Tubule30 23 of 4 0.70Down
Hindgut26 33 of 4 0.60Down
Heart20 14 of 4 0.44Down
Fat body29 94 of 4 0.66Down
Ovary106 34 of 4 2.30Up
Testis30 34 of 4 0.70Down
Male accessory glands31 73 of 4 0.70None
Virgin spermatheca27 33 of 4 0.61Down
Mated spermatheca32 33 of 4 0.71Down
Adult carcass20 40 of 4 0.50Down
Larval CNS64 114 of 4 1.42Up
Larval Salivary gland36 04 of 4 0.81Down
Larval midgut25 01 of 4 0.56Down
Larval tubule40 44 of 4 0.90None
Larval hindgut26 44 of 4 0.58Down
Larval fat body25 12 of 4 0.60Down
Larval trachea47 44 of 4 1.05None
Larval carcass31 34 of 4 0.69Down
S2 cells (growing)39 34 of 4 0.87None
Whole fly45 14 of 4

Looking for CG2864-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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