FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2864-RA through 18771 annotations produced 1 hits

poly(ADP-ribose) glycohydrolase (Parg):

Annotation Number : CG2864
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023216
Gbrowse : chrX:3562753-3565602 (-) // 100.0 //
Probeset : 1640791_at
Accessions : protein= NP_477321;, nucleotide= NM_057973;
Pathway : engulfment // inferred from mutant phenotype /// 0009408 // response to heat // inferred from mutant phenotype /// 0035
Interpro : 0005654 // nucleoplasm // inferred from direct assay
FlyMine data for FBgn0023216.
BioGrid reports that CG2864 interacts with CG5027 .
TRiP has 1 RNAi stocks for FBgn0023216 available for purchase.
VDRC has 2 RNAi stocks for FBgn0023216 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	49 ± 2	4 of 4	1.10	None
Head	26 ± 1	3 of 4	0.60	Down
Eye	17 ± 2	4 of 4	0.40	Down
Thoracicoabdominal ganglion	42 ± 4	4 of 4	0.90	None
Salivary gland	42 ± 4	2 of 4	0.93	None
Crop	33 ± 2	4 of 4	0.70	Down
Midgut	31 ± 3	4 of 4	0.70	Down
Tubule	30 ± 2	3 of 4	0.70	Down
Hindgut	26 ± 3	3 of 4	0.60	Down
Heart	20 ± 1	4 of 4	0.44	Down
Fat body	29 ± 9	4 of 4	0.66	Down
Ovary	106 ± 3	4 of 4	2.30	Up
Testis	30 ± 3	4 of 4	0.70	Down
Male accessory glands	31 ± 7	3 of 4	0.70	None
Virgin spermatheca	27 ± 3	3 of 4	0.61	Down
Mated spermatheca	32 ± 3	3 of 4	0.71	Down
Adult carcass	20 ± 4	0 of 4	0.50	Down
Larval CNS	64 ± 11	4 of 4	1.42	Up
Larval Salivary gland	36 ± 0	4 of 4	0.81	Down
Larval midgut	25 ± 0	1 of 4	0.56	Down
Larval tubule	40 ± 4	4 of 4	0.90	None
Larval hindgut	26 ± 4	4 of 4	0.58	Down
Larval fat body	25 ± 1	2 of 4	0.60	Down
Larval trachea	47 ± 4	4 of 4	1.05	None
Larval carcass	31 ± 3	4 of 4	0.69	Down
S2 cells (growing)	39 ± 3	4 of 4	0.87	None
Whole fly	45 ± 1	4 of 4

Looking for CG2864-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720