FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2917-RA through 18771 annotations produced 1 hits

Origin recognition complex subunit 4 (Orc4):

Annotation Number : CG2917
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023181
Gbrowse : chr2R:20683262-20684927 (-) // 100.0 //
Probeset : 1639877_at
Accessions : protein= NP_477320;, nucleotide= NM_057972;
Pathway : 0000808 // origin recognition complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from ele
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electro
FlyMine data for FBgn0023181.
BDGP gene expression has embryonic in situ data for Orc4: 24 pix of staining in 8 body parts.
BioGrid reports that CG2917 interacts with CG9160 CG15676 CG5708 CG7948 CG5731 CG15218 CG31811 CG2189 CG8591 CG16932 CG11206 CG6923 .
TRiP has 1 RNAi stocks for FBgn0023181 available for purchase.
VDRC has 3 RNAi stocks for FBgn0023181 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	32 ± 2	4 of 4	0.30	Down
Head	21 ± 2	4 of 4	0.20	Down
Eye	27 ± 3	4 of 4	0.25	Down
Thoracicoabdominal ganglion	30 ± 1	4 of 4	0.30	Down
Salivary gland	16 ± 5	1 of 4	0.15	Down
Crop	23 ± 1	4 of 4	0.20	Down
Midgut	11 ± 1	1 of 4	0.10	Down
Tubule	12 ± 1	3 of 4	0.10	Down
Hindgut	17 ± 0	4 of 4	0.20	Down
Heart	27 ± 0	4 of 4	0.25	Down
Fat body	21 ± 1	4 of 4	0.19	Down
Ovary	219 ± 3	4 of 4	2.00	Up
Testis	78 ± 5	4 of 4	0.70	Down
Male accessory glands	28 ± 1	4 of 4	0.30	Down
Virgin spermatheca	17 ± 0	4 of 4	0.16	Down
Mated spermatheca	25 ± 2	4 of 4	0.23	Down
Adult carcass	23 ± 1	4 of 4	0.20	Down
Larval CNS	126 ± 8	4 of 4	1.13	None
Larval Salivary gland	65 ± 2	4 of 4	0.59	Down
Larval midgut	11 ± 0	1 of 4	0.11	Down
Larval tubule	12 ± 0	4 of 4	0.10	Down
Larval hindgut	21 ± 2	4 of 4	0.19	Down
Larval fat body	33 ± 6	4 of 4	0.30	Down
Larval trachea	68 ± 5	4 of 4	0.62	Down
Larval carcass	30 ± 1	4 of 4	0.27	Down
S2 cells (growing)	91 ± 3	4 of 4	0.82	Down
Whole fly	111 ± 4	4 of 4

Looking for CG2917-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720