FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG2943-RA through 18771 annotations produced 1 hits

(CG2943):

Annotation Number : CG2943
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037530
Gbrowse : chr3R:3728974-3733088 (-) // 100.0 //
Probeset : 1627142_at
Accessions : protein= NP_649747;, nucleotide= NM_141490;
FlyMine data for FBgn0037530.
TRiP has 1 RNAi stocks for FBgn0037530 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037530 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	260 ± 4	4 of 4	0.80	Down
Head	247 ± 18	4 of 4	0.80	Down
Eye	228 ± 12	4 of 4	0.71	Down
Thoracicoabdominal ganglion	285 ± 7	4 of 4	0.90	None
Salivary gland	440 ± 10	4 of 4	1.38	Up
Crop	506 ± 20	4 of 4	1.60	Up
Midgut	273 ± 6	4 of 4	0.90	Down
Tubule	247 ± 10	4 of 4	0.80	Down
Hindgut	375 ± 9	4 of 4	1.20	Up
Heart	426 ± 19	4 of 4	1.33	Up
Fat body	619 ± 82	4 of 4	1.94	Up
Ovary	324 ± 6	4 of 4	1.00	None
Testis	542 ± 14	4 of 4	1.70	Up
Male accessory glands	479 ± 15	4 of 4	1.50	Up
Virgin spermatheca	366 ± 9	4 of 4	1.15	Up
Mated spermatheca	398 ± 29	4 of 4	1.25	None
Adult carcass	545 ± 27	4 of 4	1.70	Up
Larval CNS	250 ± 5	4 of 4	0.78	Down
Larval Salivary gland	384 ± 18	4 of 4	1.20	Up
Larval midgut	246 ± 16	4 of 4	0.77	Down
Larval tubule	366 ± 16	4 of 4	1.10	None
Larval hindgut	333 ± 12	4 of 4	1.04	None
Larval fat body	331 ± 15	4 of 4	1.00	None
Larval trachea	271 ± 20	4 of 4	0.85	Down
Larval carcass	332 ± 20	4 of 4	1.04	None
S2 cells (growing)	752 ± 22	4 of 4	2.35	Up
Whole fly	319 ± 11	4 of 4

Looking for CG2943-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720